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KX911187.2__APZ81710.1__NCPPB3778_56__00056
Bact-VirKX911187.2__APZ81710.1__NCPPB3778_56__00056
Identity
- Accession:
- KX911187 ↗
- Kingdom:
- phage
Quality
69.0
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-97
Domain cluster:
rep: NC_042336.1__YP_009638413.1__FGG38_gp52__00052__D21-92
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02467.22 best | Whib | 65.3 | 8.50e-18 | 73.3% | 96.9% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.65 | 32.0 | 3.52e-01 | 76.7% | 56.8% |
| 3c18A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 43.0 | 3.91e-01 | 76.7% | 78.0% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 30.0 | 3.18e-01 | 85.6% | 54.2% |
| 3mpiA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.54 | 47.0 | 4.31e-01 | 98.9% | 90.9% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.54 | 39.0 | 3.84e-01 | 77.8% | 85.0% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.52 | 31.0 | 3.29e-01 | 87.8% | 64.6% |
| 7kypB01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.52 | 41.0 | 3.00e-01 | 87.8% | 62.1% |
| 2el7A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.52 | 38.0 | 3.81e-01 | 85.6% | 75.5% |
| 7zghA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.51 | 40.0 | 2.68e-01 | 86.7% | 75.9% |
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.51 | 40.0 | 4.01e-01 | 100.0% | 84.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3959743 | 1022.2.1.0 ↗ | alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 | 0.94 | 66.0 | 7.84e-01 | 74.4% | 100.0% |
| 2988223 | 1022.2.1.1 ↗ | alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib | 0.94 | 69.0 | 7.15e-01 | 77.8% | 80.0% |
| 3027027 | 1022.2.1.1 ↗ | alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib | 0.86 | 64.0 | 6.65e-01 | 77.8% | 88.2% |
| 3286828 | 1022.2.1.1 ↗ | alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib | 0.81 | 57.0 | 6.68e-01 | 72.2% | 100.0% |
| 2724064 | 1022.2.1.1 ↗ | alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib | 0.80 | 56.0 | 5.91e-01 | 74.4% | 81.2% |
| 3954362 | 1022.2.1.1 ↗ | alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib | 0.71 | 63.0 | 5.91e-01 | 96.7% | 97.3% |
| 3951668 | 1022.2.1.1 ↗ | alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib | 0.70 | 53.0 | 5.84e-01 | 91.1% | 98.6% |
| 3990094 | 5086.1.1.94 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HB_LcnD | 0.61 | 39.0 | 3.23e-01 | 74.4% | 34.7% |
| 3890040 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.59 | 39.0 | 3.38e-01 | 100.0% | 44.3% |
| 3267504 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 2.83e-01 | 95.6% | 24.3% |
| 1112032 | 109.4.1.283 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › T6SS_Tse3_N | 0.52 | 43.0 | 3.83e-01 | 90.0% | 92.3% |
| 3360522 | 109.45.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Anaphase-promoting complex subunit 1 second helical domain › Anaphase-promoting complex subunit 1 second helical domain › APC1_C | 0.52 | 42.0 | 3.19e-01 | 91.1% | 55.5% |
| 3629967 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 41.0 | 2.91e-01 | 88.9% | 46.3% |
| 3381092 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.51 | 39.0 | 3.08e-01 | 83.3% | 50.2% |