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KX911187.2__APZ81730.1__NCPPB3778_36__00036
Bact-VirKX911187.2__APZ81730.1__NCPPB3778_36__00036
Identity
- Accession:
- KX911187 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-36
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.87 | 73.0 | 5.61e-01 | 97.1% | 46.2% |
| 2feaA02 | 3.90.1470.20 | Alpha Beta › Alpha-Beta Complex › thrh gene product, domain 2 › | 0.81 | 63.0 | 4.59e-01 | 100.0% | 31.6% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.72 | 58.0 | 5.19e-01 | 97.1% | 64.0% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.69 | 52.0 | 4.14e-01 | 94.1% | 38.0% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.65 | 55.0 | 4.41e-01 | 97.1% | 47.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3498703 | 219.1.1.41 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 | 0.95 | 84.0 | 4.68e-01 | 97.1% | 9.4% |
| 3638091 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.94 | 78.0 | 4.40e-01 | 91.2% | 9.4% |
| 4071991 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.93 | 82.0 | 4.99e-01 | 97.1% | 18.9% |
| 3491875 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.92 | 78.0 | 6.44e-01 | 97.1% | 58.3% |
| 3440587 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.90 | 79.0 | 4.87e-01 | 97.1% | 19.4% |
| 4937900 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.86 | 70.0 | 4.48e-01 | 94.1% | 20.0% |
| 3481174 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 54.0 | 3.19e-01 | 91.2% | 10.0% |
| 3576327 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.69 | 56.0 | 4.45e-01 | 97.1% | 42.7% |
| 3658323 | 284.1.2.1 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C | 0.60 | 51.0 | 3.66e-01 | 97.1% | 41.9% |