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KX912252.1__APC46231.1__X__00020
Bact-VirKX912252.1__APC46231.1__X__00020
Identity
- Accession:
- KX912252 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-68
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04586.23 best | Peptidase_S78 | 48.3 | 1.80e-12 | 100.0% | 40.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1o6eA00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.61 | 53.0 | 3.73e-01 | 100.0% | 36.9% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 30.0 | 2.60e-01 | 79.1% | 30.8% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.59 | 46.0 | 3.16e-01 | 89.6% | 51.6% |
| 3amuA02 | 2.40.50.1010 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 35.0 | 2.79e-01 | 100.0% | 27.9% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 29.0 | 2.53e-01 | 79.1% | 30.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083161 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.90 | 82.0 | 6.19e-01 | 100.0% | 44.8% |
| 4032431 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.89 | 82.0 | 6.11e-01 | 100.0% | 46.5% |
| 5011607 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 37.0 | 2.96e-01 | 79.1% | 27.9% |
| 3991612 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 2.76e-01 | 85.1% | 66.8% |
D2
high
residues 84-140