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KX925554.1__APC46272.1__X__00010
Bact-VirKX925554.1__APC46272.1__X__00010
Identity
- Accession:
- KX925554 ↗
- Kingdom:
- phage
Quality
66.8
mean pLDDT
Taxonomy
TaxID: 1913591
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-110
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gtnA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.59 | 33.0 | 3.86e-01 | 82.9% | 75.7% |
| 2vqrA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.58 | 43.0 | 2.80e-01 | 78.1% | 59.4% |
| 4upkA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.58 | 44.0 | 2.83e-01 | 79.0% | 60.2% |
| 1dvoA00 | 1.10.1710.10 | Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain | 0.57 | 42.0 | 3.71e-01 | 77.1% | 66.4% |
| 5hyhA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.56 | 45.0 | 3.32e-01 | 86.7% | 70.7% |
| 3woyA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 40.0 | 3.08e-01 | 77.1% | 58.9% |
| 3ibyD02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 39.0 | 4.24e-01 | 98.1% | 94.0% |
| 7xb6B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 41.0 | 3.36e-01 | 81.0% | 46.5% |
| 5x9vA01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.52 | 47.0 | 3.58e-01 | 99.0% | 62.4% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.52 | 38.0 | 4.04e-01 | 93.3% | 87.2% |
| 1di1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 46.0 | 3.35e-01 | 97.1% | 44.8% |
| 1tu9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 41.0 | 3.81e-01 | 83.8% | 100.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3770345 | 602.2.1.3 ↗ | alpha arrays › L-aspartase middle domain-like › RNA-binding protein She2p › RNA-binding protein She2p › PPP1R21_helical | 0.56 | 50.0 | 3.76e-01 | 96.2% | 90.2% |
| 5007499 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.56 | 48.0 | 3.91e-01 | 97.1% | 86.8% |
| 5009327 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.55 | 44.0 | 3.31e-01 | 86.7% | 88.9% |
| 3572169 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.53 | 46.0 | 4.33e-01 | 98.1% | 95.4% |
| 3452001 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.53 | 42.0 | 3.49e-01 | 91.4% | 48.6% |
| 3378962 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.52 | 31.0 | 2.87e-01 | 87.6% | 42.1% |
| 3191134 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.52 | 44.0 | 3.60e-01 | 98.1% | 49.2% |
| 3243820 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.52 | 39.0 | 2.78e-01 | 80.0% | 88.8% |
| 4266867 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.52 | 39.0 | 3.78e-01 | 88.6% | 71.2% |
| 4633790 | 109.4.1.141 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MRP-S27 | 0.52 | 36.0 | 2.85e-01 | 70.5% | 40.0% |
| 3594832 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 32.0 | 3.16e-01 | 86.7% | 58.2% |
| 3721783 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.51 | 45.0 | 3.13e-01 | 100.0% | 83.0% |
| 4033653 | 2484.1.1.39 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble | 0.50 | 38.0 | 3.19e-01 | 80.0% | 51.1% |
D2
medium
residues 111-170