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KX925554.1__APC46279.1__X__00017

Bact-Vir

KX925554.1__APC46279.1__X__00017

Identity

Accession:
KX925554 ↗
Kingdom:
phage

Quality

80.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Borockvirus› Streptomyces_phage_BRock

TaxID: 1913591

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-118
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 46.0 4.96e-01 96.4% 78.4%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 34.0 3.44e-01 76.8% 52.3%
1wv8A00 3.30.2390.10 Alpha Beta › 2-Layer Sandwich › TTHA1013/TTHA0281-like › TTHA1013-like 0.58 35.0 4.13e-01 84.8% 94.4%
2y23A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 30.0 3.18e-01 98.2% 54.8%
6g1nD01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 38.0 4.33e-01 94.6% 95.2%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 38.0 4.17e-01 88.4% 95.5%
4r7rA00 3.30.1490.410 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 0.51 29.0 2.91e-01 100.0% 50.8%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2673496 11.1.1.192 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set_2 0.69 46.0 4.91e-01 96.4% 76.8%
5039633 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 33.0 4.07e-01 93.8% 73.0%
4969332 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.64 35.0 4.64e-01 92.0% 100.0%
3781230 1013.1.1.1 ↗ beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › DUF3337 0.64 44.0 3.53e-01 93.8% 37.1%
4967355 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.64 36.0 4.61e-01 88.4% 96.9%
5048184 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.63 38.0 4.17e-01 88.4% 73.3%
5075488 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.63 36.0 4.38e-01 85.7% 91.2%
5023489 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 41.0 4.20e-01 100.0% 67.3%
4929701 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.63 33.0 4.27e-01 83.0% 93.3%
4948406 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.62 35.0 4.43e-01 86.6% 98.4%
4431929 4100.1.1.4 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › UPF0150 0.60 34.0 4.36e-01 92.0% 95.4%
5029920 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.58 32.0 4.08e-01 87.5% 93.8%
3298796 3131.1.1.1 ↗ a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC 0.57 45.0 4.15e-01 92.9% 65.5%
3313644 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.55 39.0 4.02e-01 90.2% 79.0%
3585414 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.54 34.0 3.43e-01 98.2% 62.7%
3915679 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.54 37.0 3.49e-01 71.4% 79.3%
3943698 206.1.3.36 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_TupA 0.54 42.0 3.15e-01 98.2% 34.4%
3228503 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.53 43.0 4.11e-01 99.1% 74.1%
4612221 2484.1.1.12 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.52 47.0 3.85e-01 99.1% 57.6%
3815901 76.1.1.2 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.52 37.0 3.27e-01 96.4% 51.9%
4196888 5.1.4.327 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd 0.52 44.0 3.04e-01 92.9% 82.2%
3288144 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.51 41.0 4.38e-01 92.0% 98.9%
3834516 76.1.1.2 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.51 37.0 3.38e-01 96.4% 57.9%
4929818 861.1.1.0 ↗ a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein 0.51 46.0 4.36e-01 98.2% 91.1%
3605064 5.1.4.74 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.51 40.0 2.63e-01 83.9% 70.3%
3275492 5.1.4.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 0.51 40.0 2.72e-01 84.8% 52.1%
4644381 5.1.3.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.51 43.0 3.21e-01 96.4% 92.3%
3931769 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 46.0 4.30e-01 100.0% 84.4%
3995339 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 38.0 3.50e-01 100.0% 60.7%
2643433 5.1.3.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.50 43.0 3.14e-01 97.3% 75.1%