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KX925554.1__APC46283.1__X__00021

Bact-Vir

KX925554.1__APC46283.1__X__00021

Identity

Accession:
KX925554 ↗
Kingdom:
phage

Quality

77.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Borockvirus› Streptomyces_phage_BRock

TaxID: 1913591

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-62
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.71 48.0 5.17e-01 100.0% 86.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 5.04e-01 100.0% 74.2%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.68 47.0 5.04e-01 100.0% 88.0%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.13e-01 98.3% 80.6%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.23e-01 100.0% 92.7%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 5.23e-01 100.0% 89.7%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 4.77e-01 100.0% 67.5%
1zczA02 3.40.140.20 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain 0.64 44.0 3.56e-01 100.0% 37.6%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 41.0 2.63e-01 70.0% 40.3%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.60 51.0 4.50e-01 100.0% 69.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 42.0 4.05e-01 100.0% 65.2%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.59 33.0 3.19e-01 93.3% 43.7%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 41.0 4.31e-01 98.3% 84.9%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.59 41.0 4.45e-01 98.3% 91.7%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.37e-01 100.0% 72.2%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.59 42.0 3.56e-01 75.0% 89.7%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.57 44.0 2.90e-01 88.3% 62.5%
1yaxB00 3.30.450.140 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PhoQ sensor domain 0.56 42.0 3.34e-01 85.0% 85.1%
5gmdA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.56 39.0 3.02e-01 75.0% 39.4%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 40.0 3.78e-01 78.3% 90.5%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 42.0 3.59e-01 85.0% 94.1%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 43.0 4.19e-01 100.0% 81.4%
2askA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.54 42.0 3.54e-01 85.0% 81.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 3.84e-01 100.0% 74.2%
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 3.11e-01 96.7% 51.2%
2a5hA03 6.20.120.40 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 31.0 3.14e-01 90.0% 50.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 45.0 4.38e-01 100.0% 92.6%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 41.0 3.42e-01 91.7% 76.6%
5v6fA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.53 44.0 3.52e-01 98.3% 84.7%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 4.19e-01 100.0% 85.5%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 43.0 4.18e-01 95.0% 90.0%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.71e-01 85.0% 97.6%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.88e-01 96.7% 72.9%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 40.0 4.01e-01 86.7% 88.5%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.90e-01 100.0% 87.3%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 39.0 3.86e-01 100.0% 76.5%
2xbkA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 41.0 2.57e-01 91.7% 57.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 4.10e-01 100.0% 85.5%
2iq1A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.52 35.0 2.39e-01 73.3% 52.1%
7pjjA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 42.0 3.28e-01 100.0% 41.9%
3fedA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.51 41.0 2.96e-01 100.0% 97.7%
1agqB00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.51 41.0 3.50e-01 88.3% 81.2%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 38.0 3.73e-01 83.3% 97.0%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.51 37.0 3.02e-01 78.3% 86.1%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 42.0 4.16e-01 100.0% 89.4%
2va0A00 3.30.450.160 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 38.0 3.39e-01 88.3% 84.8%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959440 4.1.1.180 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3107 0.79 71.0 6.92e-01 100.0% 98.5%
5002601 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.72 53.0 5.36e-01 96.7% 79.7%
5027750 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.58e-01 100.0% 89.1%
135648 4.1.1.142 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq_1 0.72 53.0 5.19e-01 98.3% 73.8%
3712219 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.72 56.0 5.54e-01 100.0% 80.0%
4400642 4.1.1.257 ↗ beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.71 51.0 4.64e-01 98.3% 55.3%
5015352 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.17e-01 100.0% 65.1%
858452 4.1.1.476 ↗ beta barrels › SH3 › SH3 › SH3 › PF30873 0.70 54.0 4.69e-01 100.0% 53.1%
4142364 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 48.0 4.70e-01 96.7% 66.2%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.70 52.0 5.35e-01 100.0% 87.3%
3839016 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 51.0 5.01e-01 100.0% 73.8%
3968342 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.69 52.0 5.46e-01 100.0% 94.3%
2697704 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 48.0 4.69e-01 100.0% 67.7%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.69 51.0 5.01e-01 100.0% 73.8%
3290899 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 52.0 5.01e-01 100.0% 71.4%
25624 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.68 52.0 5.51e-01 98.3% 98.1%
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 50.0 5.18e-01 100.0% 87.3%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.68 50.0 5.17e-01 100.0% 87.3%
4068333 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 53.0 5.17e-01 98.3% 78.5%
4214438 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 55.0 5.35e-01 100.0% 81.5%
5028741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 49.0 5.10e-01 98.3% 89.1%
4277213 4.1.1.431 ↗ beta barrels › SH3 › SH3 › SH3 › PF27152 0.67 49.0 4.72e-01 98.3% 68.6%
3977126 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.67 53.0 5.44e-01 100.0% 96.4%
4177685 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.66 49.0 4.62e-01 93.3% 64.0%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 51.0 5.15e-01 100.0% 86.7%
4432457 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 50.0 4.80e-01 100.0% 72.9%
4226849 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 51.0 4.70e-01 100.0% 65.0%
4157193 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 51.0 4.88e-01 100.0% 74.3%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 50.0 4.96e-01 100.0% 79.7%
4252954 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 50.0 4.85e-01 98.3% 74.3%
3954254 4.1.1.387 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c 0.65 50.0 4.90e-01 100.0% 78.5%
3979842 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.65 50.0 5.23e-01 100.0% 94.5%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.64 50.0 4.84e-01 100.0% 74.3%
4248855 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 50.0 4.71e-01 100.0% 70.3%
5063311 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.64 44.0 4.81e-01 93.3% 95.6%
4024913 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 43.0 4.29e-01 100.0% 66.2%
5056826 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.64 51.0 4.99e-01 100.0% 81.5%
4459365 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 50.0 4.59e-01 100.0% 66.3%
4093911 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 48.0 4.59e-01 100.0% 69.3%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.63 52.0 5.11e-01 100.0% 87.7%
3711668 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.63 55.0 4.82e-01 100.0% 87.8%
4979291 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 48.0 4.56e-01 100.0% 69.3%
5050320 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 49.0 4.63e-01 100.0% 70.7%
4083915 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 51.0 4.79e-01 100.0% 74.7%
5024227 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 5.06e-01 100.0% 88.9%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 50.0 4.72e-01 100.0% 73.3%
4971470 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 49.0 4.60e-01 100.0% 70.7%
5062120 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.46e-01 100.0% 66.7%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 45.0 3.64e-01 100.0% 40.0%
4932865 3899.1.1.0 ↗ beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 0.61 52.0 4.06e-01 100.0% 97.1%
4284778 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 51.0 4.77e-01 100.0% 76.0%
4120629 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 48.0 4.55e-01 100.0% 72.0%
4158712 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 46.0 4.47e-01 100.0% 74.3%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 53.0 4.35e-01 100.0% 55.5%
4593997 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.63e-01 100.0% 81.5%
4971532 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.45e-01 100.0% 75.7%
4943273 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.47e-01 100.0% 78.5%
5053225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.36e-01 100.0% 66.0%
3278801 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.59 41.0 4.07e-01 98.3% 69.2%
5022848 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.60e-01 100.0% 88.3%
3593943 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.58 49.0 2.94e-01 100.0% 13.3%
4929875 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.58 44.0 3.79e-01 100.0% 50.0%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 41.0 4.28e-01 96.7% 85.5%
5031165 4.1.1.93 ↗ beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.58 47.0 4.49e-01 100.0% 78.6%
5059830 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.58 50.0 4.44e-01 100.0% 73.3%
5042330 4203.1.1.0 ↗ few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like 0.57 45.0 4.33e-01 86.7% 90.0%
3252861 4081.1.1.2 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.57 37.0 2.60e-01 98.3% 18.1%
4300449 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.57 45.0 4.41e-01 100.0% 81.5%
3875549 4081.1.1.2 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.57 36.0 2.63e-01 98.3% 20.0%
3622389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 41.0 4.04e-01 100.0% 72.3%
4071917 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.56 39.0 4.23e-01 95.0% 90.0%
3917372 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.56 42.0 3.91e-01 100.0% 65.3%
3931904 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.55 38.0 3.96e-01 100.0% 81.8%
3763946 385.1.1.2 ↗ few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › TGF_beta 0.55 43.0 3.54e-01 85.0% 74.3%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 41.0 3.57e-01 100.0% 51.6%
3521739 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 44.0 4.01e-01 100.0% 65.9%
3173941 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 40.0 3.50e-01 100.0% 50.0%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 42.0 4.26e-01 100.0% 93.3%
4034031 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.53 43.0 4.25e-01 100.0% 90.8%
5018703 815.1.1.0 ↗ a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 0.52 42.0 3.70e-01 100.0% 60.0%
2427475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.78e-01 100.0% 74.6%
3415045 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.52 41.0 3.97e-01 100.0% 80.0%
3699192 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.52 42.0 2.81e-01 93.3% 26.4%
3679362 4.1.1.351 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 0.51 43.0 3.93e-01 100.0% 96.5%
3741020 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 40.0 3.90e-01 100.0% 80.0%
3870348 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.50 42.0 3.04e-01 98.3% 42.1%