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KX925554.1__APC46329.1__X__00067
Bact-VirKX925554.1__APC46329.1__X__00067
Identity
- Accession:
- KX925554 ↗
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Taxonomy
TaxID: 1913591
Cluster
View cluster (59 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-229
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.77 | 53.0 | 5.47e-01 | 100.0% | 73.3% |
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.73 | 56.0 | 5.53e-01 | 100.0% | 75.1% |
| 1ob8A00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 34.0 | 4.49e-01 | 76.6% | 79.8% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.69 | 34.0 | 4.84e-01 | 74.3% | 100.0% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.69 | 31.0 | 4.64e-01 | 74.8% | 97.9% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.65 | 26.0 | 3.21e-01 | 74.8% | 56.0% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.64 | 25.0 | 3.35e-01 | 95.4% | 63.9% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.64 | 53.0 | 5.31e-01 | 99.1% | 85.4% |
| 5zyuA01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.63 | 52.0 | 5.40e-01 | 100.0% | 92.0% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.60 | 24.0 | 3.16e-01 | 95.9% | 63.3% |
| 3l0aA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.58 | 52.0 | 4.86e-01 | 100.0% | 78.2% |
| 3m7vA02 | 3.30.70.1250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phosphopentomutase | 0.55 | 28.0 | 3.73e-01 | 96.8% | 86.8% |
| 2x3eA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 29.0 | 3.34e-01 | 79.4% | 74.7% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955488 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.83 | 40.0 | 5.76e-01 | 78.9% | 93.6% |
| 5000157 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.83 | 53.0 | 5.62e-01 | 100.0% | 70.5% |
| 4942551 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.80 | 57.0 | 5.71e-01 | 100.0% | 70.9% |
| 5012280 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.80 | 55.0 | 5.71e-01 | 99.1% | 74.1% |
| 4943737 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 52.0 | 6.05e-01 | 99.1% | 95.0% |
| 3969697 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 49.0 | 5.87e-01 | 98.6% | 93.5% |
| 3588071 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 51.0 | 5.93e-01 | 98.6% | 94.4% |
| 424674 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.73 | 55.0 | 5.46e-01 | 100.0% | 73.8% |
| 3625561 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.70 | 33.0 | 4.77e-01 | 76.6% | 97.0% |
| 4311371 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.67 | 38.0 | 4.96e-01 | 77.1% | 98.3% |
| 5057784 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 31.0 | 4.62e-01 | 72.5% | 100.0% |
| 5063524 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.65 | 38.0 | 4.38e-01 | 99.1% | 77.4% |
| 5010842 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 35.0 | 4.12e-01 | 81.7% | 73.5% |
| 3249181 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.63 | 29.0 | 4.20e-01 | 74.8% | 100.0% |
| 2439587 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.61 | 50.0 | 4.94e-01 | 100.0% | 79.8% |
| 3555330 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.59 | 56.0 | 5.04e-01 | 100.0% | 83.9% |
| 4031223 | 2008.1.1.204 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2800 | 0.58 | 50.0 | 4.75e-01 | 100.0% | 78.8% |
| 3457392 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.57 | 54.0 | 4.87e-01 | 99.5% | 83.0% |
| 3195250 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 41.0 | 4.21e-01 | 95.0% | 75.7% |
| 3508213 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 45.0 | 4.94e-01 | 81.2% | 97.8% |
| 865573 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.56 | 31.0 | 3.66e-01 | 79.4% | 77.3% |
| 4010258 | 2008.1.1.58 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF3799 | 0.56 | 53.0 | 4.91e-01 | 100.0% | 83.0% |
| 5014895 | 2007.15.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase | 0.54 | 28.0 | 3.40e-01 | 97.2% | 76.3% |
| 4955135 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.54 | 50.0 | 4.40e-01 | 99.1% | 73.5% |
| 5043227 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.53 | 49.0 | 4.42e-01 | 99.1% | 73.0% |
| 4947565 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.52 | 48.0 | 4.26e-01 | 99.1% | 76.4% |
| 4590621 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.51 | 47.0 | 3.97e-01 | 100.0% | 63.9% |
| 4966910 | 7518.1.1.6 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_A | 0.50 | 28.0 | 3.61e-01 | 75.2% | 95.8% |