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KX925554.1__APC46378.1__X__00116

Bact-Vir

KX925554.1__APC46378.1__X__00116

Identity

Accession:
KX925554 ↗
Kingdom:
phage

Quality

77.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Borockvirus› Streptomyces_phage_BRock

TaxID: 1913591

Cluster

View cluster (56 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-66
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 57.0 6.30e-01 100.0% 97.9%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.64e-01 100.0% 83.9%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 58.0 6.12e-01 100.0% 98.1%
1irxA02 2.30.30.300 Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like 0.72 47.0 5.41e-01 91.8% 97.7%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 54.0 5.19e-01 100.0% 74.3%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 4.93e-01 100.0% 73.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 5.19e-01 100.0% 86.8%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.68 54.0 4.92e-01 90.2% 65.8%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 48.0 5.00e-01 100.0% 85.5%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.19e-01 100.0% 83.9%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 5.43e-01 100.0% 93.4%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 53.0 4.96e-01 100.0% 76.0%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 53.0 5.36e-01 100.0% 93.4%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 4.70e-01 100.0% 67.4%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 53.0 5.03e-01 100.0% 86.5%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 49.0 5.04e-01 100.0% 94.9%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 53.0 5.17e-01 100.0% 89.4%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 48.0 4.37e-01 100.0% 64.3%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.60 52.0 4.42e-01 100.0% 78.8%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 48.0 4.89e-01 100.0% 91.7%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 48.0 4.83e-01 100.0% 88.9%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 5.12e-01 100.0% 92.2%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 5.13e-01 100.0% 98.5%
2crfA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 50.0 4.09e-01 100.0% 71.2%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 47.0 4.42e-01 100.0% 71.1%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 48.0 4.96e-01 100.0% 98.3%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 43.0 4.39e-01 100.0% 84.5%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 50.0 4.92e-01 100.0% 90.9%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 50.0 4.72e-01 100.0% 81.1%
4ntdA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 47.0 3.35e-01 95.1% 57.2%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 4.11e-01 100.0% 84.6%
7lt2A01 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.57 40.0 2.71e-01 75.4% 69.0%
1ri9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 47.0 4.36e-01 100.0% 74.0%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.56 44.0 3.00e-01 86.9% 86.8%
2eyzA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 43.0 3.74e-01 82.0% 54.9%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 49.0 4.77e-01 100.0% 91.0%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.73e-01 95.1% 57.4%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 43.0 4.33e-01 100.0% 91.9%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 48.0 4.14e-01 100.0% 96.8%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 44.0 4.57e-01 95.1% 100.0%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 44.0 4.36e-01 100.0% 89.2%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.52 43.0 4.11e-01 91.8% 88.6%
3kg7B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 42.0 2.75e-01 93.4% 62.8%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3621818 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.81 56.0 6.07e-01 100.0% 88.0%
3989485 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.79 57.0 6.13e-01 100.0% 92.0%
3241817 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 59.0 6.01e-01 100.0% 81.7%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.78 54.0 5.86e-01 98.4% 88.0%
2561577 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.78 56.0 5.63e-01 100.0% 75.4%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.77 59.0 5.51e-01 100.0% 66.7%
2723695 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 42.0 4.77e-01 86.9% 71.1%
3441677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 58.0 6.32e-01 100.0% 98.0%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 54.0 5.90e-01 98.4% 90.0%
1263713 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.75 54.0 5.77e-01 100.0% 88.5%
3263031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 53.0 5.24e-01 100.0% 70.8%
1289661 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.75 52.0 5.10e-01 100.0% 67.2%
3243143 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 59.0 5.82e-01 100.0% 80.0%
3936726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.53e-01 100.0% 89.1%
4929875 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.70 53.0 4.49e-01 100.0% 49.0%
3736411 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.70 63.0 5.64e-01 100.0% 75.3%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.70 54.0 5.10e-01 100.0% 70.7%
1068760 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.69 49.0 4.52e-01 100.0% 59.0%
3471615 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.68 59.0 4.83e-01 100.0% 73.0%
5065184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 45.0 5.02e-01 86.9% 95.6%
3573262 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.66 54.0 4.75e-01 100.0% 61.1%
3907870 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 55.0 4.99e-01 100.0% 69.6%
4134876 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.66 54.0 3.92e-01 100.0% 33.3%
3482676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.64e-01 100.0% 95.0%
3211367 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 55.0 4.83e-01 100.0% 63.3%
3498145 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 54.0 5.34e-01 100.0% 85.9%
3899828 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 52.0 4.79e-01 100.0% 68.8%
157818 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 54.0 4.72e-01 100.0% 62.6%
3879164 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.64 53.0 5.01e-01 100.0% 76.0%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 52.0 5.28e-01 100.0% 91.7%
3789697 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 55.0 4.47e-01 100.0% 79.2%
3842062 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.63 53.0 4.53e-01 100.0% 57.0%
3619599 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 52.0 4.84e-01 100.0% 73.3%
3479350 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 52.0 4.64e-01 100.0% 64.7%
3554293 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 53.0 5.19e-01 100.0% 86.2%
3777744 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 52.0 4.59e-01 100.0% 62.2%
3521739 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 51.0 4.61e-01 100.0% 64.7%
4346748 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.63 54.0 4.31e-01 100.0% 72.3%
3924338 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 51.0 4.88e-01 100.0% 78.6%
3487936 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.88e-01 100.0% 78.6%
3513923 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.72e-01 100.0% 73.3%
3900733 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 51.0 4.91e-01 100.0% 80.0%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.62 50.0 3.42e-01 100.0% 25.0%
3243417 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 53.0 4.21e-01 100.0% 73.1%
3514453 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 50.0 4.67e-01 100.0% 73.3%
3999508 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 5.09e-01 100.0% 84.3%
3636812 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 49.0 4.88e-01 100.0% 84.6%
3899589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.96e-01 96.7% 91.7%
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.60 53.0 5.26e-01 100.0% 95.4%
3904253 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 49.0 4.83e-01 100.0% 86.2%
3413864 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 52.0 3.77e-01 100.0% 36.4%
3246255 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 47.0 4.52e-01 100.0% 78.6%
3995675 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 48.0 4.84e-01 100.0% 95.0%
5040518 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.44e-01 83.6% 96.0%
3742291 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 48.0 4.72e-01 100.0% 87.7%
3594081 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.43e-01 98.4% 95.0%
279006 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 46.0 4.51e-01 100.0% 82.6%
3776390 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.56 45.0 3.80e-01 100.0% 50.4%
3841524 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 45.0 3.85e-01 100.0% 52.7%
4127826 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.56 48.0 4.77e-01 100.0% 95.4%
4537356 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.55 47.0 4.75e-01 95.1% 98.3%
2410170 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.55 48.0 4.81e-01 100.0% 95.2%
3594811 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 48.0 4.74e-01 100.0% 98.5%
4977860 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.54 47.0 2.85e-01 100.0% 91.0%