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KX925554.1__APC46394.1__X__00132

Bact-Vir

KX925554.1__APC46394.1__X__00132

Identity

Accession:
KX925554 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Borockvirus› Streptomyces_phage_BRock

TaxID: 1913591

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-90
PDB
Domain cluster: rep: CAKLQF020000011.1__CAH1085983.1__SAMEA5780031_02231__00031__D106-155
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b8vA03 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.89 75.0 7.68e-01 100.0% 95.9%
4b8vA02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.88 76.0 6.64e-01 100.0% 65.8%
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.84 69.0 7.21e-01 98.0% 100.0%
4b8vA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.83 70.0 6.36e-01 100.0% 70.1%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.81 66.0 6.67e-01 100.0% 92.0%
2djpA00 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.80 68.0 5.85e-01 100.0% 61.0%
2mkxA00 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.73 59.0 5.93e-01 100.0% 90.2%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 55.0 4.68e-01 100.0% 58.0%
3pfyA02 6.10.20.180 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.64 47.0 4.57e-01 80.4% 91.2%
4pl0A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 48.0 3.26e-01 100.0% 30.3%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 3.97e-01 100.0% 91.3%
6k8nA02 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.55 39.0 3.17e-01 82.4% 91.6%
4iiwA01 3.30.1490.480 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Endolytic murein transglycosylase 0.50 37.0 3.42e-01 88.2% 96.1%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3979943 101.15.1.3 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X 0.92 81.0 8.24e-01 94.1% 96.0%
4492966 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.91 78.0 7.64e-01 100.0% 85.5%
5004560 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.91 82.0 8.00e-01 100.0% 90.9%
4128043 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 74.0 7.81e-01 96.1% 100.0%
3691772 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 76.0 7.45e-01 100.0% 85.5%
3720958 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 76.0 7.72e-01 100.0% 94.0%
4022922 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 76.0 7.45e-01 100.0% 85.5%
2042916 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.89 75.0 7.41e-01 100.0% 87.0%
2124917 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 75.0 5.13e-01 100.0% 29.2%
3417561 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 74.0 4.50e-01 100.0% 15.9%
2124476 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 76.0 5.43e-01 100.0% 35.6%
2074716 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 74.0 7.41e-01 100.0% 92.2%
2047861 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 74.0 7.05e-01 100.0% 81.0%
2035755 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 72.0 5.72e-01 100.0% 46.5%
3234671 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 73.0 7.17e-01 100.0% 85.5%
3349612 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.87 71.0 7.24e-01 100.0% 90.0%
3974521 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 72.0 6.82e-01 100.0% 76.7%
3955076 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 70.0 7.41e-01 90.2% 100.0%
3969916 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 72.0 6.41e-01 100.0% 65.7%
4995817 101.15.1.4 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 0.86 77.0 6.92e-01 100.0% 75.7%
4680476 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 73.0 6.50e-01 100.0% 67.1%
3464064 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 72.0 5.96e-01 100.0% 54.1%
3655335 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 72.0 4.89e-01 100.0% 27.9%
4177991 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 75.0 7.37e-01 100.0% 89.1%
4249176 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 71.0 6.73e-01 100.0% 76.7%
3452845 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 71.0 6.97e-01 100.0% 83.6%
4448562 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 68.0 6.68e-01 96.1% 80.0%
2895417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.85 76.0 6.61e-01 100.0% 66.2%
3587382 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 75.0 7.37e-01 100.0% 90.9%
3670445 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 73.0 4.41e-01 100.0% 15.5%
3165071 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 72.0 7.02e-01 100.0% 85.5%
4205026 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 71.0 6.48e-01 100.0% 70.8%
3426433 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 72.0 6.78e-01 100.0% 78.3%
4404011 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 70.0 6.27e-01 100.0% 65.7%
2809236 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 74.0 7.01e-01 100.0% 83.9%
3375189 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.85 76.0 6.74e-01 100.0% 71.4%
3641672 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.84 72.0 6.23e-01 100.0% 62.7%
3675929 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 70.0 6.82e-01 100.0% 83.6%
3666767 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.84 76.0 5.86e-01 100.0% 47.6%
3458171 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 71.0 6.53e-01 100.0% 72.3%
3165082 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 71.0 7.18e-01 100.0% 94.0%
3651054 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.84 75.0 5.23e-01 100.0% 32.3%
3838194 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 68.0 7.23e-01 98.0% 100.0%
3985839 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 70.0 6.23e-01 100.0% 65.7%
3903953 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 69.0 6.96e-01 100.0% 90.0%
3898121 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 69.0 6.79e-01 100.0% 83.6%
3711427 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 67.0 6.07e-01 100.0% 65.2%
2968802 101.15.1.11 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_NFP 0.84 74.0 5.34e-01 100.0% 36.2%
3320955 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.84 71.0 6.49e-01 100.0% 72.3%
3679146 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 71.0 5.33e-01 100.0% 39.2%
4069716 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.83 70.0 5.28e-01 100.0% 40.0%
3191020 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 75.0 7.10e-01 100.0% 85.0%
4157099 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 69.0 7.08e-01 98.0% 95.8%
3636417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.83 73.0 7.27e-01 100.0% 94.3%
1758716 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 69.0 6.92e-01 100.0% 90.4%
4118675 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 66.0 6.96e-01 98.0% 100.0%
3353525 101.15.1.6 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 0.82 69.0 5.12e-01 100.0% 37.6%
3413453 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 70.0 7.12e-01 100.0% 94.0%
3422876 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 72.0 6.86e-01 100.0% 86.7%
1759182 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 68.0 6.88e-01 100.0% 92.2%
3381619 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 73.0 4.46e-01 100.0% 17.4%
3359799 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.81 72.0 5.22e-01 100.0% 37.6%
3303205 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 70.0 6.67e-01 100.0% 81.7%
4491522 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 67.0 6.37e-01 100.0% 78.3%
3819870 101.15.1.6 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 0.81 73.0 5.29e-01 100.0% 37.8%
3250125 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 72.0 6.54e-01 100.0% 75.4%
3421939 101.15.1.9 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 0.81 72.0 5.29e-01 100.0% 40.0%
3981327 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 67.0 6.66e-01 100.0% 87.0%
3305689 101.15.1.9 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 0.81 70.0 5.02e-01 100.0% 35.0%
3355076 101.15.1.6 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 0.80 69.0 6.56e-01 100.0% 81.7%
3337328 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.80 72.0 4.42e-01 100.0% 18.3%
2124918 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 70.0 5.09e-01 100.0% 36.8%
None — 0.80 71.0 5.28e-01 100.0% 40.8%
3183656 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 72.0 6.62e-01 100.0% 78.5%
3188069 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.79 71.0 6.57e-01 100.0% 78.5%
3656643 101.15.1.9 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 0.79 71.0 5.15e-01 100.0% 37.8%
3191428 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.77 68.0 6.72e-01 100.0% 96.2%
3166029 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.77 65.0 6.38e-01 100.0% 90.9%
3448128 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.77 69.0 5.03e-01 100.0% 40.0%
3989756 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 65.0 6.73e-01 96.1% 100.0%
3611431 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.77 68.0 6.44e-01 100.0% 88.3%
3269916 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.76 64.0 6.14e-01 98.0% 81.7%
1832368 101.15.1.4 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 0.76 66.0 4.48e-01 100.0% 65.8%
3970261 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.76 68.0 6.69e-01 100.0% 94.4%
3963519 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.75 66.0 6.14e-01 100.0% 89.2%
3598919 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.75 66.0 4.21e-01 100.0% 26.7%
4180515 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.72 60.0 5.97e-01 100.0% 92.6%
1649977 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.64 55.0 4.65e-01 100.0% 56.7%
3968457 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.64 55.0 4.70e-01 100.0% 60.0%
4053910 3953.1.1.2 ↗ a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N2 0.62 52.0 4.34e-01 100.0% 51.0%
1606365 3953.1.1.0 ↗ a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain 0.62 51.0 4.13e-01 100.0% 46.7%
3164837 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.60 49.0 4.41e-01 100.0% 63.7%
3386481 3953.1.1.0 ↗ a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain 0.60 48.0 4.05e-01 100.0% 50.0%
3606376 304.55.2.8 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons 0.52 43.0 3.53e-01 100.0% 57.1%