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KX925554.1__APC46398.1__X__00136
Bact-VirKX925554.1__APC46398.1__X__00136
Identity
- Accession:
- KX925554 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Taxonomy
TaxID: 1913591
Cluster
View cluster (40 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-145
Domain cluster:
rep: IMGVR_UViG_2684622743_000001-2684622743-2685523771__D41-153
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.70 | 61.0 | 5.76e-01 | 95.7% | 90.9% |
| 3fayA00 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.55 | 46.0 | 3.14e-01 | 94.6% | 55.7% |
| 1x4oA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.54 | 38.0 | 4.09e-01 | 95.7% | 88.5% |
| 2j9qB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 37.0 | 2.72e-01 | 77.4% | 44.2% |
| 2vsqA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.50 | 39.0 | 2.97e-01 | 84.9% | 67.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586672 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.72 | 63.0 | 6.03e-01 | 94.6% | 84.8% |
| 4957561 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.71 | 63.0 | 6.04e-01 | 95.7% | 88.6% |
| 333304 | 6050.1.1.1 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_1 | 0.70 | 60.0 | 5.77e-01 | 96.8% | 81.7% |
| 3968270 | 3103.1.1.2 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_13 | 0.68 | 59.0 | 5.60e-01 | 94.6% | 82.7% |
| 3520362 | 109.12.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › MAS20 | 0.56 | 31.0 | 3.08e-01 | 76.3% | 49.5% |
| 3780812 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 40.0 | 2.66e-01 | 79.6% | 23.5% |
| 3970126 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.51 | 40.0 | 3.04e-01 | 86.0% | 75.7% |
D2
medium
residues 176-257
Domain cluster:
rep: IMGVR_UViG_3300014934_000024-3300014934-Ga0169773_1017706__D5-85
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e82E02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 37.0 | 2.79e-01 | 73.2% | 29.0% |
| 2xu8A00 | 3.90.70.190 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) | 0.53 | 39.0 | 3.55e-01 | 95.1% | 56.9% |
| 8d8lE01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.52 | 40.0 | 3.97e-01 | 100.0% | 79.1% |
| 2peeB02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 34.0 | 3.04e-01 | 100.0% | 43.5% |
| 3zg9B02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 44.0 | 2.95e-01 | 100.0% | 89.0% |
| 1musA01 | 1.10.246.40 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Tn5 transposase; domain 1 | 0.50 | 31.0 | 3.31e-01 | 70.7% | 74.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077628 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.79 | 65.0 | 6.46e-01 | 89.0% | 100.0% |
| 4671846 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 30.0 | 3.21e-01 | 100.0% | 62.9% |
| 3218566 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.53 | 37.0 | 2.52e-01 | 73.2% | 35.4% |
| 4936367 | 2007.13.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit › CobN-Mg_chel | 0.52 | 44.0 | 3.20e-01 | 100.0% | 53.3% |
| 3343301 | 2007.13.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit › CobN-Mg_chel | 0.52 | 43.0 | 3.18e-01 | 100.0% | 51.9% |
| 4384801 | 2007.13.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit › CobN-Mg_chel | 0.51 | 43.0 | 3.14e-01 | 100.0% | 64.4% |
| 4525468 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.51 | 43.0 | 3.95e-01 | 96.3% | 91.8% |
| 3211980 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.50 | 38.0 | 2.65e-01 | 82.9% | 76.2% |