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KX925554.1__APC46440.1__X__00179
Bact-VirKX925554.1__APC46440.1__X__00179
Identity
- Accession:
- KX925554 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Taxonomy
TaxID: 1913591
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-94
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.97e-01 | 95.6% | 98.6% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.72e-01 | 94.5% | 94.5% |
| 1g19A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 43.0 | 3.31e-01 | 76.9% | 94.2% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 32.0 | 3.79e-01 | 79.1% | 80.7% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 37.0 | 4.13e-01 | 93.4% | 82.6% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.56 | 37.0 | 3.82e-01 | 92.3% | 70.9% |
| 7c5yA02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.75e-01 | 87.9% | 96.7% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 35.0 | 4.04e-01 | 83.5% | 92.1% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.55 | 45.0 | 3.49e-01 | 91.2% | 66.8% |
| 1szlA01 | 2.20.100.10 | Mainly Beta › Single Sheet › TSP-1 type 1 repeat › Thrombospondin type-1 (TSP1) repeat | 0.55 | 31.0 | 3.73e-01 | 74.7% | 94.2% |
| 2bi0A02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 41.0 | 3.49e-01 | 80.2% | 83.0% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.98e-01 | 89.0% | 85.8% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.84e-01 | 89.0% | 89.8% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.53 | 46.0 | 4.54e-01 | 100.0% | 94.7% |
| 1vclA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 42.0 | 3.70e-01 | 92.3% | 98.7% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.52 | 41.0 | 3.90e-01 | 91.2% | 72.6% |
| 3j7yU00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 40.0 | 3.75e-01 | 82.4% | 79.3% |
| 4dolA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.51 | 42.0 | 3.55e-01 | 90.1% | 81.4% |
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 36.0 | 3.78e-01 | 73.6% | 98.8% |
| 3kspA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.68e-01 | 90.1% | 85.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948467 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.82 | 57.0 | 6.62e-01 | 95.6% | 100.0% |
| 3358748 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.60 | 49.0 | 5.13e-01 | 96.7% | 100.0% |
| 3322460 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.59 | 50.0 | 4.63e-01 | 100.0% | 73.9% |
| 3650296 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.58 | 47.0 | 4.73e-01 | 96.7% | 85.3% |
| 4050042 | 4.1.1.441 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26332 | 0.58 | 45.0 | 4.74e-01 | 94.5% | 93.8% |
| 3383095 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.58 | 51.0 | 3.66e-01 | 97.8% | 67.2% |
| 3573739 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.57 | 47.0 | 4.37e-01 | 90.1% | 76.5% |
| 3876541 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.56 | 39.0 | 2.73e-01 | 70.3% | 76.8% |
| 3444353 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 50.0 | 3.72e-01 | 100.0% | 62.1% |
| 3496336 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 48.0 | 3.03e-01 | 95.6% | 28.8% |
| 3770801 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.55 | 48.0 | 4.74e-01 | 100.0% | 96.8% |
| 3425387 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.54 | 45.0 | 3.73e-01 | 95.6% | 97.7% |
| 3216974 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.52 | 41.0 | 4.32e-01 | 91.2% | 100.0% |
| 3433434 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.51 | 44.0 | 3.44e-01 | 100.0% | 49.3% |
| 4251418 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.51 | 40.0 | 3.12e-01 | 87.9% | 47.0% |
| 3413757 | 220.1.1.26 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II | 0.50 | 43.0 | 3.84e-01 | 100.0% | 86.4% |