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KX961629.1__AOZ61648.1__BJ4_25__00025

Bact-Vir

KX961629.1__AOZ61648.1__BJ4_25__00025

Identity

Accession:
KX961629 ↗
Kingdom:
phage

Quality

72.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-67
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 50.0 3.94e-01 71.4% 36.7%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 61.0 4.64e-01 100.0% 90.1%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.67 49.0 3.81e-01 85.7% 36.7%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 57.0 3.65e-01 100.0% 36.4%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.66 57.0 5.24e-01 98.2% 78.4%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 43.0 3.92e-01 73.2% 59.2%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.62 43.0 4.64e-01 73.2% 95.5%
1u14A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.61 48.0 3.46e-01 89.3% 44.4%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.07e-01 100.0% 45.5%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.60 48.0 3.70e-01 92.9% 89.3%
2ljwA00 3.30.428.40 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Protein of unknown function DUF3067 0.60 44.0 3.57e-01 100.0% 42.3%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.60 47.0 3.55e-01 91.1% 57.7%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 44.0 4.34e-01 82.1% 74.2%
3kksB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 44.0 3.37e-01 91.1% 53.9%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.57 47.0 3.06e-01 100.0% 45.8%
3tfiA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.57 46.0 2.90e-01 96.4% 49.3%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.57 45.0 3.66e-01 92.9% 43.3%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.57 43.0 4.03e-01 83.9% 70.4%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.56 45.0 3.61e-01 98.2% 67.6%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.56 40.0 3.68e-01 96.4% 54.8%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.55 44.0 4.12e-01 100.0% 82.9%
5aj3P00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.54 42.0 3.47e-01 91.1% 74.4%
4ao8A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 46.0 3.09e-01 98.2% 50.0%
2w0mA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 41.0 2.80e-01 82.1% 84.1%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 38.0 3.30e-01 78.6% 84.4%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.53 41.0 3.12e-01 89.3% 50.7%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 39.0 2.90e-01 80.4% 31.8%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.53 44.0 2.79e-01 100.0% 35.5%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 38.0 3.63e-01 83.9% 65.7%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.52 43.0 3.36e-01 100.0% 57.9%
2qzbA00 2.60.460.10 Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain 0.52 36.0 2.71e-01 73.2% 32.4%
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 46.0 2.98e-01 100.0% 87.7%
3ktnA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 45.0 2.82e-01 100.0% 80.3%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 37.0 3.03e-01 80.4% 60.3%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.51 39.0 3.03e-01 89.3% 91.4%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 41.0 3.45e-01 100.0% 54.6%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.20e-01 100.0% 72.5%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 37.0 3.46e-01 78.6% 68.1%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.51 39.0 3.44e-01 87.5% 54.0%
6w0pA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 43.0 2.58e-01 98.2% 13.5%
2d8iA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 40.0 3.57e-01 92.9% 69.3%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 37.0 3.17e-01 82.1% 71.7%
1viuC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.50 43.0 3.09e-01 98.2% 73.6%
1z24A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 39.0 2.95e-01 100.0% 70.9%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5800 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.72 57.0 5.98e-01 87.5% 96.0%
3176053 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 58.0 4.52e-01 98.2% 41.5%
3586428 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.68 60.0 4.85e-01 100.0% 83.5%
3267290 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.67 58.0 3.62e-01 100.0% 50.7%
3822596 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.67 56.0 3.54e-01 100.0% 51.9%
4114247 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.67 46.0 4.26e-01 78.6% 57.1%
3496244 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 55.0 4.19e-01 96.4% 37.9%
3709083 206.1.3.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF7920 0.66 39.0 2.38e-01 100.0% 9.6%
3705153 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 55.0 4.24e-01 96.4% 40.7%
3284535 295.1.1.13 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3090 0.65 53.0 4.27e-01 94.6% 89.2%
3714703 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.64 52.0 4.35e-01 100.0% 51.0%
3592181 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.64 51.0 4.05e-01 96.4% 60.0%
3606814 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.64 54.0 4.91e-01 98.2% 78.2%
4012616 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.63 51.0 4.23e-01 98.2% 70.4%
4644945 246.1.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase 0.62 52.0 3.59e-01 100.0% 93.3%
4945424 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 43.0 3.31e-01 73.2% 32.3%
3978756 3197.1.1.1 a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N 0.62 48.0 3.84e-01 87.5% 43.3%
3483806 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.62 50.0 3.74e-01 91.1% 92.0%
5061930 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 49.0 4.26e-01 94.6% 54.7%
3709343 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.61 52.0 4.00e-01 100.0% 41.7%
3482073 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.61 45.0 4.50e-01 82.1% 80.0%
3544618 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.61 52.0 4.62e-01 100.0% 65.9%
4862964 3675.1.1.1 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.61 37.0 2.58e-01 100.0% 18.7%
4120420 295.1.1.15 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 0.60 46.0 3.76e-01 85.7% 87.0%
3589823 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 49.0 4.73e-01 92.9% 86.2%
3903260 109.4.1.2707 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PH_21 0.60 47.0 2.90e-01 96.4% 12.3%
3427749 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.60 45.0 4.32e-01 82.1% 70.8%
5036111 213.1.1.31 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.59 42.0 3.14e-01 78.6% 60.6%
4779411 243.3.1.6 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Monellin 0.59 41.0 4.44e-01 73.2% 95.5%
3905746 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.59 46.0 4.32e-01 87.5% 71.4%
3241305 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.59 50.0 3.83e-01 98.2% 86.4%
3985617 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.59 46.0 4.41e-01 92.9% 74.3%
3364063 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.58 49.0 3.78e-01 98.2% 80.0%
3920675 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.58 46.0 4.20e-01 87.5% 66.7%
3483808 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.58 46.0 4.29e-01 87.5% 70.0%
3706713 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 2.91e-01 100.0% 12.6%
5075212 802.1.1.1 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.58 46.0 3.94e-01 87.5% 56.7%
3907293 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 45.0 3.90e-01 98.2% 52.4%
119245 252.3.1.1 a+b two layers › DNA-binding domain › Uncharacterized protein yaiA › Uncharacterized protein yaiA › YaiA 0.57 43.0 4.03e-01 83.9% 70.4%
3672898 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.57 47.0 3.76e-01 98.2% 92.0%
3718300 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 44.0 4.19e-01 96.4% 81.3%
3914585 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 43.0 3.72e-01 92.9% 50.5%
4407464 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.56 49.0 3.02e-01 100.0% 71.5%
4426175 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.55 38.0 3.59e-01 71.4% 61.4%
4926797 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 43.0 3.42e-01 92.9% 57.7%
4024735 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.54 42.0 4.01e-01 91.1% 77.1%
4937869 3414.1.1.0 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.54 35.0 3.13e-01 80.4% 42.4%
5008603 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.54 40.0 2.90e-01 85.7% 25.3%
3390825 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.53 39.0 3.71e-01 71.4% 69.2%
5072315 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 38.0 3.07e-01 82.1% 35.8%
3164017 9.11.1.0 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.53 45.0 3.93e-01 100.0% 94.4%
3580415 7525.1.1.2 a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.52 38.0 2.48e-01 82.1% 24.6%
4429847 3675.1.1.1 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.52 37.0 2.75e-01 75.0% 29.7%
3659492 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.52 45.0 2.52e-01 100.0% 26.4%
4492006 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.52 42.0 2.78e-01 94.6% 97.4%
3786329 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.52 36.0 3.65e-01 87.5% 74.5%
3927652 2484.5.1.0 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.52 39.0 3.37e-01 92.9% 78.2%
3485727 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 38.0 3.35e-01 82.1% 81.1%
4994226 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.51 38.0 3.03e-01 83.9% 36.8%
4027440 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.51 40.0 3.43e-01 94.6% 81.8%
3585171 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.51 38.0 3.31e-01 78.6% 57.6%
5039400 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.51 45.0 2.85e-01 100.0% 82.7%
3922240 3755.3.1.321 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WHAMM-JMY_N 0.51 39.0 3.32e-01 91.1% 88.2%
4348096 3675.1.1.1 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.51 35.0 2.66e-01 75.0% 29.7%
4930470 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.51 41.0 3.61e-01 91.1% 69.4%
3619264 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.50 37.0 3.27e-01 82.1% 55.6%
4542899 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.50 38.0 2.88e-01 89.3% 60.6%
5056578 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.50 42.0 2.74e-01 100.0% 87.8%