←Back to structures
KX961630.1__AOZ62201.1__QCM8_283__00280
Bact-VirKX961630.1__AOZ62201.1__QCM8_283__00280
Identity
- Accession:
- KX961630 ↗
- Kingdom:
- phage
Quality
97.3
mean pLDDT
Taxonomy
TaxID: 1909403
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.76 | 54.0 | 3.71e-01 | 83.3% | 23.2% |
| 2zcuA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.70 | 56.0 | 4.30e-01 | 91.7% | 65.2% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.69 | 51.0 | 4.07e-01 | 100.0% | 37.7% |
| 5e9hB01 | 1.10.10.850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.68 | 60.0 | 4.54e-01 | 100.0% | 42.5% |
| 3jr7A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.68 | 48.0 | 3.60e-01 | 83.3% | 30.5% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.66 | 50.0 | 3.61e-01 | 83.3% | 61.1% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.64 | 54.0 | 3.43e-01 | 100.0% | 86.3% |
| 3tuiD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 51.0 | 3.28e-01 | 93.8% | 68.5% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 3.94e-01 | 87.5% | 60.9% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.60 | 46.0 | 4.78e-01 | 91.7% | 88.9% |
| 7v8uA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 47.0 | 3.03e-01 | 95.8% | 40.0% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.51 | 44.0 | 3.16e-01 | 97.9% | 50.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4012507 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.79 | 63.0 | 4.16e-01 | 87.5% | 22.1% |
| 3578179 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.79 | 58.0 | 4.33e-01 | 79.2% | 32.2% |
| 3716168 | 868.1.1.4 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › VTC | 0.79 | 67.0 | 4.06e-01 | 93.8% | 15.6% |
| 3285377 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.76 | 66.0 | 4.04e-01 | 95.8% | 36.4% |
| 3979567 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.72 | 53.0 | 4.36e-01 | 81.2% | 43.3% |
| 3185222 | 868.1.1.4 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › VTC | 0.71 | 58.0 | 3.59e-01 | 93.8% | 15.3% |
| 4016157 | 6026.1.1.1 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21 | 0.70 | 58.0 | 4.22e-01 | 100.0% | 33.3% |
| 5053145 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.69 | 52.0 | 4.61e-01 | 83.3% | 55.7% |
| 5082520 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 48.0 | 4.74e-01 | 77.1% | 76.0% |
| 4952257 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.66 | 55.0 | 4.32e-01 | 100.0% | 44.2% |
| 4990058 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.64 | 54.0 | 3.62e-01 | 93.8% | 30.0% |
| 2589777 | 3176.1.1.1 ↗ | alpha duplicates or obligate multimers › Head fiber protein gp8.5 fibrous portion › Head fiber protein gp8.5 fibrous portion › Head fiber protein gp8.5 fibrous portion › Phage_head_fibr | 0.62 | 42.0 | 2.92e-01 | 89.6% | 20.6% |
| 3231906 | 397.7.1.4 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › C_tripleX | 0.62 | 48.0 | 4.94e-01 | 100.0% | 91.1% |
| 4106875 | 2005.1.1.25 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › HIGH_NTase1 | 0.60 | 48.0 | 2.86e-01 | 93.8% | 84.8% |
| 4318142 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.59 | 51.0 | 3.68e-01 | 100.0% | 36.4% |
| 1179381 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.59 | 44.0 | 4.36e-01 | 83.3% | 94.1% |