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KX961632.1__AOZ62401.1__SBP8a_151__00151

Bact-Vir

KX961632.1__AOZ62401.1__SBP8a_151__00151

Identity

Accession:
KX961632 ↗
Kingdom:
phage

Quality

66.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Wphvirus› Bacillus_phage_SBP8a

TaxID: 1909401

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-90
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3psfA04 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.72 52.0 4.15e-01 75.9% 79.3%
2hoeA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 46.0 3.75e-01 71.1% 86.1%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.66 49.0 4.02e-01 78.3% 50.7%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.66 51.0 3.93e-01 84.3% 53.9%
2qm1B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 45.0 3.68e-01 71.1% 88.8%
1zc6B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 45.0 3.86e-01 72.3% 90.5%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 46.0 2.92e-01 73.5% 60.8%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.65 50.0 4.03e-01 84.3% 50.6%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.64 46.0 4.24e-01 77.1% 100.0%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.63 47.0 4.20e-01 79.5% 95.8%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 35.0 4.08e-01 88.0% 79.3%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 37.0 4.04e-01 91.6% 73.1%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.62 46.0 4.08e-01 78.3% 99.2%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 46.0 3.81e-01 83.1% 66.7%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 44.0 4.03e-01 80.7% 93.0%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 44.0 3.04e-01 80.7% 94.6%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.59 44.0 4.34e-01 80.7% 94.4%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 42.0 2.90e-01 77.1% 88.2%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.58 43.0 3.62e-01 78.3% 73.3%
2r0hA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.78e-01 86.7% 71.9%
1tyeA00 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.58 44.0 2.79e-01 81.9% 94.5%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 42.0 3.72e-01 79.5% 100.0%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 43.0 2.80e-01 78.3% 89.3%
2zgoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 3.61e-01 84.3% 66.5%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.57 41.0 3.22e-01 75.9% 90.7%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 43.0 3.59e-01 84.3% 72.6%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.55 38.0 3.57e-01 71.1% 78.4%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 43.0 3.32e-01 85.5% 56.4%
3n72A00 3.15.10.20 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Activator of Hsp90 ATPase Aha1, N-terminal domain 0.53 37.0 3.20e-01 74.7% 76.9%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.52 38.0 3.24e-01 79.5% 93.9%
2a5zA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 2.96e-01 84.3% 62.8%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.50 44.0 3.50e-01 100.0% 54.2%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4031638 7089.1.1.1 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF1108 0.69 45.0 4.49e-01 71.1% 64.7%
160441 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.66 51.0 3.93e-01 84.3% 53.9%
3852789 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.65 48.0 2.78e-01 77.1% 21.9%
3987480 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.65 50.0 3.93e-01 84.3% 55.7%
3768027 109.4.1.1794 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.65 48.0 2.99e-01 77.1% 24.0%
3556954 109.4.1.69 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IKI3 0.65 46.0 3.14e-01 73.5% 27.5%
3746311 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.65 46.0 3.38e-01 73.5% 70.4%
3546198 5.1.4.149 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 0.65 52.0 3.43e-01 86.7% 94.3%
3920826 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.65 45.0 3.56e-01 72.3% 82.4%
3588533 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.65 50.0 3.87e-01 84.3% 53.7%
5038930 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 46.0 2.96e-01 74.7% 82.6%
5002666 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.64 51.0 3.92e-01 88.0% 64.0%
3794738 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.64 51.0 3.87e-01 85.5% 73.8%
5038443 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 41.0 4.37e-01 74.7% 73.3%
5016360 5.1.5.231 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › SBBP 0.64 46.0 2.98e-01 75.9% 89.4%
5056195 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 48.0 3.17e-01 79.5% 93.1%
3912012 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.64 45.0 3.42e-01 73.5% 72.8%
3197066 5.1.4.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.64 46.0 2.99e-01 77.1% 39.7%
3735753 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 44.0 2.51e-01 72.3% 8.5%
3579989 5.1.4.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.63 46.0 3.03e-01 77.1% 31.1%
5047088 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 44.0 3.21e-01 71.1% 85.5%
3225336 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 48.0 4.01e-01 81.9% 91.0%
3500002 5.1.3.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.63 45.0 3.06e-01 74.7% 80.3%
5044594 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.62 45.0 4.42e-01 75.9% 78.9%
2048183 10.1.1.50 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Dit-like_CBM2 0.62 49.0 3.59e-01 85.5% 51.3%
3231482 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 48.0 3.79e-01 84.3% 78.3%
4140248 5.1.4.577 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YqgU 0.62 43.0 2.88e-01 71.1% 77.4%
3194130 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.62 43.0 2.77e-01 71.1% 44.8%
4868007 5.1.2.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › NHL 0.62 45.0 3.12e-01 74.7% 95.7%
4002544 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.62 44.0 2.67e-01 74.7% 92.1%
4124524 2484.1.1.12 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.61 44.0 3.29e-01 74.7% 70.7%
3813951 241.15.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.61 42.0 3.46e-01 71.1% 78.1%
5079230 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.61 43.0 3.96e-01 72.3% 84.8%
4033840 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.61 47.0 3.68e-01 84.3% 54.2%
3576415 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 44.0 2.91e-01 74.7% 73.0%
3933159 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 43.0 2.87e-01 72.3% 74.6%
3242741 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 45.0 3.16e-01 78.3% 27.8%
3506427 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.61 51.0 4.51e-01 95.2% 83.2%
5018109 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.61 48.0 3.93e-01 86.7% 73.8%
5039064 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 48.0 3.12e-01 85.5% 87.3%
3589527 5.1.4.35 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.61 43.0 2.91e-01 74.7% 96.5%
3602148 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 41.0 3.90e-01 71.1% 86.0%
3513698 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.60 49.0 3.77e-01 91.6% 63.4%
5030013 5.1.4.43 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.60 46.0 2.91e-01 81.9% 86.3%
3743651 6.1.1.11 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Fascin 0.59 45.0 3.69e-01 83.1% 90.6%
4246471 2484.1.1.12 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.59 42.0 3.36e-01 75.9% 78.3%
4298652 2484.1.1.11 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p 0.58 42.0 3.71e-01 74.7% 80.8%
3196366 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.58 42.0 3.26e-01 77.1% 62.2%
4012750 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 42.0 2.74e-01 77.1% 85.3%
4017127 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 42.0 2.89e-01 75.9% 84.3%
4991564 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 44.0 3.61e-01 83.1% 71.6%
3482713 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 38.0 3.29e-01 72.3% 80.7%
3486202 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 39.0 2.54e-01 81.9% 90.8%
D2 high residues 97-146
PDB