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KX965989.1__APC46490.1__X__00041
Bact-VirKX965989.1__APC46490.1__X__00041
Identity
- Accession:
- KX965989 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Taxonomy
TaxID: 1913112
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-83
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fzbA02 | 1.20.5.3070 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.83 | 58.0 | 6.53e-01 | 74.1% | 97.5% |
| 1kq4A00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.82 | 60.0 | 3.97e-01 | 81.5% | 20.7% |
| 2dg7A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.78 | 63.0 | 4.29e-01 | 88.9% | 26.3% |
| 2h09A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.78 | 57.0 | 5.64e-01 | 79.6% | 75.0% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 4.91e-01 | 92.6% | 47.3% |
| 2aplA01 | 1.10.8.330 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.77 | 59.0 | 5.41e-01 | 87.0% | 64.7% |
| 1yqgA02 | 1.10.3730.10 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like | 0.75 | 62.0 | 4.86e-01 | 90.7% | 46.9% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.75 | 61.0 | 3.96e-01 | 90.7% | 20.9% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.75 | 55.0 | 3.97e-01 | 79.6% | 33.6% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.74 | 50.0 | 3.69e-01 | 70.4% | 32.6% |
| 2ahrA02 | 1.10.3730.10 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like | 0.74 | 61.0 | 4.85e-01 | 90.7% | 48.1% |
| 1nh2B00 | 1.10.287.100 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 52.0 | 5.53e-01 | 81.5% | 93.5% |
| 3w1eA01 | 3.30.1660.40 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › FlgT, N-terminal domain | 0.71 | 50.0 | 4.18e-01 | 74.1% | 47.8% |
| 4p5aC00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.65 | 54.0 | 3.55e-01 | 90.7% | 23.8% |
| 2r7cA02 | 3.30.428.20 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain | 0.64 | 46.0 | 3.33e-01 | 77.8% | 52.9% |
| 1hwyA01 | 1.10.287.140 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 41.0 | 4.25e-01 | 90.7% | 94.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3241046 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.84 | 70.0 | 4.73e-01 | 88.9% | 55.4% |
| 4954674 | 101.31.1.0 ↗ | alpha arrays › HTH › Bacteriophage Sf6 terminase small subunit › Bacteriophage Sf6 terminase small subunit | 0.82 | 67.0 | 5.26e-01 | 87.0% | 86.7% |
| 5047182 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.82 | 70.0 | 6.56e-01 | 90.7% | 75.4% |
| 3708724 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.81 | 64.0 | 4.86e-01 | 85.2% | 41.7% |
| 4564711 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.77 | 60.0 | 5.39e-01 | 85.2% | 66.7% |
| 3115 | 4199.1.1.1 ↗ | alpha arrays › PG0816-like › PG0816-like › PG0816-like › DUF1896 | 0.77 | 59.0 | 4.19e-01 | 87.0% | 29.5% |
| 4267174 | 614.1.1.24 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › GlutR_dimer | 0.76 | 59.0 | 5.33e-01 | 85.2% | 66.7% |
| 3279199 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.74 | 51.0 | 4.66e-01 | 70.4% | 58.6% |
| 3066663 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.72 | 57.0 | 3.61e-01 | 88.9% | 17.0% |
| 1208317 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.70 | 53.0 | 4.16e-01 | 81.5% | 40.7% |
| 3344802 | 6158.1.1.0 ↗ | alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region | 0.66 | 52.0 | 5.02e-01 | 92.6% | 80.0% |
| 3472066 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.65 | 47.0 | 4.21e-01 | 75.9% | 60.0% |
| 3804219 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 53.0 | 4.49e-01 | 90.7% | 68.9% |