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KX982260.1__APC46555.1__X__00033
Bact-VirKX982260.1__APC46555.1__X__00033
Identity
- Accession:
- KX982260 ↗
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-56
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 54.0 | 4.28e-01 | 100.0% | 64.5% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 54.0 | 4.70e-01 | 100.0% | 82.6% |
| 3uoxB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 46.0 | 2.96e-01 | 83.3% | 61.7% |
| 4wfsA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 53.0 | 3.50e-01 | 100.0% | 37.8% |
| 4bpzA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 41.0 | 2.66e-01 | 72.2% | 20.3% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 50.0 | 4.07e-01 | 100.0% | 66.7% |
| 6y48D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 47.0 | 3.01e-01 | 96.3% | 63.8% |
| 1ha6A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 42.0 | 3.97e-01 | 85.2% | 74.3% |
| 2mnjB00 | 2.60.40.4160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 3.36e-01 | 74.1% | 69.3% |
| 3oa4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 41.0 | 3.18e-01 | 83.3% | 40.6% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 40.0 | 3.87e-01 | 83.3% | 81.8% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 3.89e-01 | 100.0% | 76.4% |
| 5cbeE00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 41.0 | 3.95e-01 | 87.0% | 87.5% |
| 3lhoA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.53 | 39.0 | 2.66e-01 | 83.3% | 37.7% |
| 6w1kA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.53 | 40.0 | 2.61e-01 | 85.2% | 34.7% |
| 3rmuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 39.0 | 3.04e-01 | 81.5% | 42.5% |
| 2vpaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 2.96e-01 | 94.4% | 73.0% |
| 6xofA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 2.84e-01 | 96.3% | 84.6% |
| 1jc4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 38.0 | 3.01e-01 | 88.9% | 97.9% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.52 | 37.0 | 3.10e-01 | 75.9% | 81.1% |
| 6u8yK01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.51 | 41.0 | 3.13e-01 | 98.1% | 56.5% |
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 39.0 | 3.31e-01 | 88.9% | 65.3% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 35.0 | 3.39e-01 | 100.0% | 61.8% |
| 6bu2A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 37.0 | 2.83e-01 | 83.3% | 39.3% |
| 5inwA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 35.0 | 2.87e-01 | 74.1% | 75.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077602 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.68 | 45.0 | 2.91e-01 | 70.4% | 15.6% |
| 3252808 | 1170.1.2.0 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) | 0.65 | 49.0 | 4.55e-01 | 85.2% | 82.9% |
| 3298595 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.62 | 42.0 | 3.08e-01 | 72.2% | 34.8% |
| 5047010 | 2008.1.1.63 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MvaI_BcnI | 0.62 | 56.0 | 3.64e-01 | 100.0% | 63.6% |
| 3992587 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 41.0 | 2.38e-01 | 72.2% | 59.7% |
| 3203103 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.59 | 45.0 | 2.98e-01 | 88.9% | 65.3% |
| 3175415 | 211.1.1.55 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF29700 | 0.59 | 49.0 | 4.80e-01 | 94.4% | 96.7% |
| 5075225 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 50.0 | 3.97e-01 | 100.0% | 66.4% |
| 3963561 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.58 | 47.0 | 4.35e-01 | 88.9% | 98.6% |
| 2605262 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.56 | 44.0 | 3.41e-01 | 90.7% | 100.0% |
| 1684841 | 241.13.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › SopD | 0.56 | 44.0 | 3.77e-01 | 85.2% | 81.2% |
| 4185893 | 4.1.1.394 ↗ | beta barrels › SH3 › SH3 › SH3 › SlpA | 0.54 | 44.0 | 4.26e-01 | 100.0% | 92.3% |
| 3347499 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.54 | 43.0 | 3.96e-01 | 87.0% | 68.6% |
| 1412633 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 37.0 | 3.69e-01 | 74.1% | 70.7% |
| 3935301 | 391.1.2.11 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd | 0.53 | 35.0 | 3.50e-01 | 85.2% | 67.3% |
| 3403990 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.52 | 44.0 | 3.65e-01 | 98.1% | 59.2% |
| 3396958 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.51 | 43.0 | 3.63e-01 | 98.1% | 60.0% |
| 4460993 | 57.1.1.1 ↗ | beta complex topology › Cloacin translocation domain › Cloacin translocation domain › Cloacin translocation domain › Cloacin | 0.51 | 38.0 | 2.62e-01 | 87.0% | 85.8% |
| 4369177 | 391.1.2.3 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC | 0.50 | 44.0 | 3.75e-01 | 98.1% | 83.0% |
| 3490023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 34.0 | 3.12e-01 | 74.1% | 62.5% |