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KX987999.1__AQN32439.1__BCP12_016__00016
Bact-VirKX987999.1__AQN32439.1__BCP12_016__00016
Identity
- Accession:
- KX987999 ↗
- Kingdom:
- phage
Quality
57.3
mean pLDDT
Taxonomy
TaxID: 1913122
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n0uA03 | 3.90.1430.10 | Alpha Beta › Alpha-Beta Complex › Yeast translation eEF2 (G' domain) › Yeast translation eEF2 (G' domain) | 0.70 | 59.0 | 4.67e-01 | 100.0% | 48.6% |
| 3floB00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.66 | 45.0 | 3.07e-01 | 77.1% | 19.4% |
| 2ii3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.60 | 42.0 | 2.73e-01 | 75.0% | 89.7% |
| 6g9sA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 50.0 | 3.02e-01 | 97.9% | 81.7% |
| 4i9fA02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.59 | 34.0 | 2.59e-01 | 89.6% | 24.1% |
| 1sxvA00 | 3.90.80.10 | Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase | 0.58 | 44.0 | 3.09e-01 | 83.3% | 51.9% |
| 3u37A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.58 | 42.0 | 2.64e-01 | 77.1% | 77.0% |
| 6we5A00 | 3.90.80.10 | Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase | 0.58 | 43.0 | 2.91e-01 | 83.3% | 43.7% |
| 1cjaA02 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.58 | 40.0 | 2.77e-01 | 95.8% | 20.3% |
| 2iqcA00 | 1.25.40.490 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 42.0 | 2.84e-01 | 79.2% | 24.9% |
| 3mcwA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.57 | 34.0 | 2.29e-01 | 79.2% | 14.4% |
| 3hlbD00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 47.0 | 2.79e-01 | 97.9% | 80.4% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.55 | 40.0 | 2.64e-01 | 77.1% | 51.7% |
| 2apoB00 | 2.20.28.40 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › H/ACA ribonucleoprotein complex, subunit Nop10 | 0.55 | 42.0 | 4.10e-01 | 95.8% | 78.2% |
| 3i6iA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.54 | 45.0 | 3.42e-01 | 95.8% | 78.6% |
| 3okyB02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.54 | 35.0 | 3.46e-01 | 75.0% | 59.6% |
| 6h05A00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 40.0 | 2.60e-01 | 81.2% | 85.2% |
| 4fk1A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 3.01e-01 | 95.8% | 73.3% |
| 4lugB00 | 3.90.80.10 | Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase | 0.52 | 43.0 | 3.00e-01 | 100.0% | 50.6% |
| 3d1cA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 2.77e-01 | 97.9% | 24.3% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 36.0 | 2.25e-01 | 79.2% | 85.8% |
| 2abjD02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.50 | 40.0 | 2.74e-01 | 89.6% | 66.9% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3615461 | 355.1.1.2 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › PSI | 0.71 | 48.0 | 4.76e-01 | 81.2% | 68.0% |
| 3918999 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.68 | 56.0 | 3.41e-01 | 100.0% | 28.1% |
| 5062616 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.68 | 37.0 | 2.18e-01 | 97.9% | 6.1% |
| 4646206 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.67 | 41.0 | 3.07e-01 | 100.0% | 25.2% |
| 3248411 | 2004.1.1.15 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU,EFTUD2 | 0.67 | 56.0 | 3.36e-01 | 100.0% | 21.4% |
| 3589872 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.65 | 50.0 | 3.52e-01 | 83.3% | 70.0% |
| 3789560 | 375.1.1.14 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L32p | 0.65 | 39.0 | 3.31e-01 | 89.6% | 32.5% |
| 4512685 | 4076.2.1.0 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like | 0.65 | 41.0 | 3.09e-01 | 100.0% | 27.0% |
| 4012767 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 54.0 | 3.31e-01 | 100.0% | 24.3% |
| 4211249 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 35.0 | 3.18e-01 | 81.2% | 35.4% |
| 5036185 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 43.0 | 4.05e-01 | 72.9% | 83.3% |
| 3259236 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.61 | 36.0 | 2.88e-01 | 85.4% | 26.0% |
| 3273618 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.60 | 36.0 | 3.20e-01 | 83.3% | 38.6% |
| 3907181 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 38.0 | 3.11e-01 | 91.7% | 32.6% |
| 1503829 | 3512.1.1.2 ↗ | beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › YadA_stalk | 0.60 | 41.0 | 2.47e-01 | 72.9% | 11.3% |
| 3709218 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 43.0 | 3.43e-01 | 81.2% | 82.4% |
| 5032007 | 375.1.1.204 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central | 0.58 | 41.0 | 3.21e-01 | 75.0% | 47.6% |
| 4942509 | 375.1.1.204 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central | 0.58 | 40.0 | 3.35e-01 | 75.0% | 55.6% |
| 3276479 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.57 | 43.0 | 2.85e-01 | 81.2% | 26.3% |
| 3928404 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.56 | 33.0 | 3.59e-01 | 77.1% | 65.0% |
| 4980361 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.56 | 39.0 | 2.39e-01 | 77.1% | 10.1% |
| 1787990 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.56 | 44.0 | 3.14e-01 | 91.7% | 45.8% |
| 4648786 | 101.1.2.29 ↗ | alpha arrays › HTH › HTH › winged helix domain › PTS_2-RNA | 0.56 | 45.0 | 3.34e-01 | 91.7% | 35.4% |
| 3926464 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.55 | 40.0 | 3.19e-01 | 77.1% | 69.5% |
| 4947916 | 2484.1.1.71 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RACo_C_ter | 0.54 | 43.0 | 2.79e-01 | 89.6% | 44.1% |
| 5050748 | 375.1.1.204 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central | 0.54 | 39.0 | 3.18e-01 | 79.2% | 42.2% |
| 3584164 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 38.0 | 3.05e-01 | 100.0% | 37.9% |
| 3860615 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.54 | 40.0 | 3.23e-01 | 93.8% | 39.0% |
| 3225455 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.54 | 32.0 | 2.93e-01 | 75.0% | 33.3% |
| 4025981 | 875.1.1.1 ↗ | a+b two layers › Chorismate synthase, AroC › Chorismate synthase, AroC › Chorismate synthase, AroC › Chorismate_synt | 0.54 | 45.0 | 2.74e-01 | 100.0% | 85.5% |
| 4395672 | 4333.1.1.6 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › M_Eco57I_C | 0.52 | 36.0 | 2.35e-01 | 72.9% | 27.4% |
| 3537276 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 36.0 | 2.92e-01 | 75.0% | 74.7% |
| 4187705 | 377.1.3.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › zf-FPG_IleRS | 0.51 | 31.0 | 3.10e-01 | 79.2% | 57.1% |
| 4886011 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.51 | 38.0 | 3.59e-01 | 83.3% | 90.0% |
| None | — | 0.51 | 38.0 | 2.36e-01 | 83.3% | 17.2% | |
| 3699147 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.50 | 36.0 | 2.36e-01 | 81.2% | 36.5% |
| 5019399 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.50 | 37.0 | 3.59e-01 | 81.2% | 74.5% |
| 2067090 | 1019.1.1.1 ↗ | few secondary structure elements › Ezh2 MCSS domain › Ezh2 MCSS domain › Ezh2 MCSS domain › Ezh2_MCSS_fung | 0.50 | 41.0 | 3.82e-01 | 100.0% | 92.5% |