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KY000082.1__APD20757.1__X__00059

Bact-Vir

KY000082.1__APD20757.1__X__00059

Identity

Accession:
KY000082 ↗
Kingdom:
phage

Quality

73.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-52
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3uuxB01 6.10.280.220 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 41.0 3.25e-01 73.1% 33.6%
6bsbB00 6.10.140.600 Special › Helix non-globular › Helix Hairpins › 0.54 37.0 3.82e-01 82.7% 77.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3203369 7577.1.1.4 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC 0.58 47.0 2.74e-01 88.5% 16.0%
4990332 2004.1.1.211 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P 0.57 43.0 2.99e-01 86.5% 41.5%
3628577 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.57 47.0 3.33e-01 94.2% 70.6%
3945331 10.12.1.40 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC_2 0.56 45.0 2.91e-01 94.2% 24.4%
3520437 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.55 43.0 3.07e-01 94.2% 59.5%
3611739 109.4.1.888 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_N 0.51 43.0 2.38e-01 94.2% 11.5%
3749999 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 43.0 3.63e-01 96.2% 57.8%