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KY006853.1__APZ81804.1__vBEliSR6L_39__00039

Bact-Vir

KY006853.1__APZ81804.1__vBEliSR6L_39__00039

Identity

Accession:
KY006853 ↗
Kingdom:
phage

Quality

66.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Erythrobacter_phage_vB_EliS_R6L

TaxID: 1913119

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-46
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7rkbA01 3.90.420.10 Alpha Beta › Alpha-Beta Complex › Sulfite Oxidase; Chain A, domain 2 › Oxidoreductase, molybdopterin-binding domain 0.54 37.0 2.72e-01 75.6% 25.6%
6yiiA01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.53 36.0 2.40e-01 73.3% 88.5%
1rmdA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.53 34.0 3.68e-01 93.3% 100.0%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.51 36.0 2.49e-01 75.6% 26.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3483429 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 41.0 2.90e-01 73.3% 71.4%
3615345 304.102.1.1 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.55 37.0 2.36e-01 75.6% 46.9%
3596419 375.1.1.77 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 0.53 35.0 3.57e-01 71.1% 75.0%
4989442 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.52 42.0 2.85e-01 95.6% 75.0%