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KY006853.1__APZ81809.1__vBEliSR6L_44__00044
Bact-VirKY006853.1__APZ81809.1__vBEliSR6L_44__00044
Identity
- Accession:
- KY006853 ↗
- Kingdom:
- phage
Quality
90.7
mean pLDDT
Taxonomy
TaxID: 1913119
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-80
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.70 | 45.0 | 4.05e-01 | 75.0% | 48.5% |
| 2qzbA00 | 2.60.460.10 | Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain | 0.61 | 45.0 | 3.54e-01 | 88.9% | 38.6% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 41.0 | 4.41e-01 | 98.6% | 86.4% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 39.0 | 4.20e-01 | 95.8% | 79.0% |
| 2e5aA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.60 | 34.0 | 3.15e-01 | 90.3% | 43.0% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 4.14e-01 | 100.0% | 83.3% |
| 3wj2B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 43.0 | 2.83e-01 | 81.9% | 26.3% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 41.0 | 3.82e-01 | 79.2% | 63.8% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 41.0 | 2.61e-01 | 76.4% | 43.4% |
| 1vw4502 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 42.0 | 3.93e-01 | 86.1% | 67.4% |
| 5l2pA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 42.0 | 2.74e-01 | 83.3% | 26.5% |
| 2hb5A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 36.0 | 2.89e-01 | 70.8% | 62.0% |
| 3aimA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 41.0 | 2.77e-01 | 83.3% | 28.3% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 38.0 | 3.83e-01 | 75.0% | 78.9% |
| 2epbA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 4.20e-01 | 88.9% | 91.2% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 39.0 | 3.34e-01 | 83.3% | 82.3% |
| 4bsjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.44e-01 | 88.9% | 60.2% |
| 4omfA00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.50 | 40.0 | 2.61e-01 | 90.3% | 89.1% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 39.0 | 3.88e-01 | 97.2% | 79.7% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947515 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 40.0 | 4.40e-01 | 86.1% | 63.3% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 53.0 | 4.58e-01 | 100.0% | 53.6% |
| 5061147 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 53.0 | 4.80e-01 | 100.0% | 65.3% |
| 3520868 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 56.0 | 4.50e-01 | 94.4% | 90.7% |
| 3952939 | 220.1.1.82 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 | 0.64 | 47.0 | 4.68e-01 | 77.8% | 94.7% |
| 4992459 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.63 | 33.0 | 3.36e-01 | 90.3% | 50.0% |
| 5052257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 41.0 | 4.44e-01 | 98.6% | 81.7% |
| 4505972 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.62 | 42.0 | 2.82e-01 | 72.2% | 20.9% |
| 184898 | 6043.1.1.1 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › DUF1131 | 0.61 | 45.0 | 4.56e-01 | 88.9% | 78.9% |
| 3661102 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 38.0 | 4.24e-01 | 86.1% | 85.5% |
| 3746411 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.59 | 42.0 | 4.18e-01 | 80.6% | 72.0% |
| 3592181 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.59 | 50.0 | 4.16e-01 | 97.2% | 72.6% |
| 3952804 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 39.0 | 4.31e-01 | 86.1% | 89.1% |
| 3574976 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.59 | 32.0 | 3.54e-01 | 91.7% | 65.5% |
| 3435691 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.58 | 41.0 | 4.29e-01 | 84.7% | 83.1% |
| 4266613 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 43.0 | 4.07e-01 | 79.2% | 70.6% |
| 3858387 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 45.0 | 2.65e-01 | 88.9% | 25.9% |
| 3705153 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 48.0 | 3.94e-01 | 94.4% | 84.4% |
| 5003966 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.57 | 39.0 | 4.03e-01 | 97.2% | 80.0% |
| 4335022 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 48.0 | 4.41e-01 | 100.0% | 71.6% |
| 3507047 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.56 | 45.0 | 3.99e-01 | 86.1% | 79.0% |
| 4446877 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.56 | 38.0 | 2.63e-01 | 72.2% | 46.8% |
| 3992587 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 47.0 | 2.76e-01 | 93.1% | 13.1% |
| 3958768 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 46.0 | 4.50e-01 | 93.1% | 92.5% |
| 3493131 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 42.0 | 3.79e-01 | 81.9% | 68.0% |
| 3494433 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 41.0 | 3.50e-01 | 81.9% | 49.2% |
| 4537756 | 330.1.1.25 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26980 | 0.54 | 39.0 | 3.79e-01 | 79.2% | 68.2% |
| 4078090 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.53 | 46.0 | 2.89e-01 | 95.8% | 24.0% |
| 3179206 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 37.0 | 3.69e-01 | 76.4% | 69.6% |
| 3636874 | 220.1.1.69 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 | 0.53 | 46.0 | 3.75e-01 | 100.0% | 86.4% |
| 4969580 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.52 | 40.0 | 2.97e-01 | 87.5% | 79.5% |
| 4103424 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 38.0 | 3.61e-01 | 77.8% | 71.8% |
| 5072187 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.52 | 44.0 | 2.73e-01 | 95.8% | 21.3% |
| 3961859 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.52 | 42.0 | 2.74e-01 | 91.7% | 73.8% |
| 3933565 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.51 | 41.0 | 2.65e-01 | 93.1% | 19.5% |