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KY022433.1__APD18996.1__X__00191

Bact-Vir

KY022433.1__APD18996.1__X__00191

Identity

Accession:
KY022433 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_J14

TaxID: 1916097

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 49.0 3.57e-01 100.0% 71.7%
1feuA01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.54 39.0 3.40e-01 85.5% 48.4%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 3.53e-01 89.1% 51.1%
3tvjB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 42.0 3.57e-01 98.2% 58.9%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 3.41e-01 96.4% 48.7%
1dfuP00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.52 38.0 3.24e-01 85.5% 46.8%
1v29B02 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 3.26e-01 83.6% 50.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3784453 239.3.1.0 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.54 45.0 3.26e-01 92.7% 41.2%
4549698 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.52 41.0 3.57e-01 94.5% 53.7%
4387110 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.51 42.0 3.58e-01 98.2% 92.0%
3581358 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 42.0 3.14e-01 96.4% 47.1%
3973282 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.50 42.0 3.46e-01 98.2% 58.2%