←Back to structures
KY056619.1__APD21401.1__Iz_57__00057
Bact-VirKY056619.1__APD21401.1__Iz_57__00057
Identity
- Accession:
- KY056619 ↗
- Kingdom:
- phage
Quality
88.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 214-283
Domain cluster:
rep: MT104122.1__QIG62552.1__X__00038__D20-102
CATH (73)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.94 | 73.0 | 5.64e-01 | 98.6% | 41.3% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 78.0 | 6.81e-01 | 98.6% | 64.3% |
| 1z7uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 77.0 | 6.48e-01 | 98.6% | 57.3% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 73.0 | 7.78e-01 | 100.0% | 96.8% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 74.0 | 7.14e-01 | 98.6% | 78.2% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 82.0 | 7.02e-01 | 100.0% | 64.8% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 76.0 | 6.53e-01 | 98.6% | 60.6% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 75.0 | 7.90e-01 | 100.0% | 98.4% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 77.0 | 6.62e-01 | 98.6% | 62.1% |
| 1xmkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 72.0 | 6.94e-01 | 100.0% | 77.2% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 76.0 | 7.38e-01 | 100.0% | 84.4% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 78.0 | 7.31e-01 | 98.6% | 80.5% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 81.0 | 6.70e-01 | 100.0% | 63.5% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 77.0 | 7.75e-01 | 100.0% | 95.7% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 76.0 | 6.52e-01 | 98.6% | 62.9% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 73.0 | 7.56e-01 | 97.1% | 97.0% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 72.0 | 6.31e-01 | 98.6% | 63.0% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 80.0 | 7.02e-01 | 98.6% | 71.9% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 78.0 | 6.50e-01 | 100.0% | 60.7% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 64.0 | 7.02e-01 | 80.0% | 96.5% |
| 4rayA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 75.0 | 6.98e-01 | 98.6% | 77.6% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 77.0 | 6.92e-01 | 98.6% | 73.6% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 77.0 | 7.42e-01 | 98.6% | 87.2% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 79.0 | 6.81e-01 | 100.0% | 68.0% |
| 3lmmB05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 68.0 | 7.27e-01 | 100.0% | 100.0% |
| 4g6qA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 74.0 | 6.77e-01 | 98.6% | 74.7% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 70.0 | 5.50e-01 | 98.6% | 44.7% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 78.0 | 6.67e-01 | 100.0% | 67.0% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 78.0 | 6.48e-01 | 100.0% | 64.0% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 76.0 | 6.59e-01 | 100.0% | 68.9% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 69.0 | 7.18e-01 | 98.6% | 98.4% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 73.0 | 6.95e-01 | 100.0% | 84.1% |
| 3bpvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 76.0 | 5.93e-01 | 100.0% | 54.7% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 76.0 | 5.71e-01 | 100.0% | 49.7% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 75.0 | 6.42e-01 | 100.0% | 66.7% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 73.0 | 6.04e-01 | 100.0% | 63.3% |
| 2fbiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 75.0 | 5.86e-01 | 100.0% | 52.2% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 75.0 | 5.63e-01 | 100.0% | 49.0% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 70.0 | 5.78e-01 | 98.6% | 55.8% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 73.0 | 5.85e-01 | 100.0% | 60.5% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 70.0 | 6.59e-01 | 100.0% | 79.8% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 73.0 | 6.66e-01 | 100.0% | 79.8% |
| 5iceA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 70.0 | 6.10e-01 | 100.0% | 66.3% |
| 4y66F01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 6.78e-01 | 100.0% | 98.5% |
| 1cf7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 64.0 | 6.53e-01 | 100.0% | 92.5% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 73.0 | 5.77e-01 | 100.0% | 56.8% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 73.0 | 5.52e-01 | 100.0% | 62.7% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 68.0 | 6.26e-01 | 97.1% | 79.1% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 6.76e-01 | 98.6% | 98.4% |
| 3e1sA01 | 1.10.10.2220 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.76 | 67.0 | 6.09e-01 | 98.6% | 81.1% |
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 67.0 | 6.26e-01 | 100.0% | 79.5% |
| 2pexA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 68.0 | 5.29e-01 | 100.0% | 50.0% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 68.0 | 5.37e-01 | 100.0% | 51.9% |
| 1vtnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 67.0 | 5.89e-01 | 100.0% | 75.5% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 4.84e-01 | 100.0% | 47.0% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 65.0 | 5.32e-01 | 100.0% | 58.3% |
| 2kpmA01 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.72 | 60.0 | 5.89e-01 | 92.9% | 98.7% |
| 7dg2C01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.71 | 64.0 | 6.30e-01 | 100.0% | 96.0% |
| 2mh9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 5.17e-01 | 100.0% | 78.0% |
| 7ewfA01 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.70 | 61.0 | 4.23e-01 | 100.0% | 29.5% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 62.0 | 5.47e-01 | 100.0% | 69.9% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.69 | 60.0 | 5.78e-01 | 98.6% | 93.8% |
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.68 | 58.0 | 5.26e-01 | 97.1% | 83.7% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.68 | 60.0 | 4.00e-01 | 98.6% | 52.0% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.68 | 56.0 | 5.67e-01 | 100.0% | 94.3% |
| 1u5tB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 59.0 | 5.59e-01 | 100.0% | 98.8% |
| 2o61A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 4.28e-01 | 95.7% | 99.1% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 45.0 | 2.93e-01 | 94.3% | 84.1% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.54 | 39.0 | 3.68e-01 | 77.1% | 64.6% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.53 | 44.0 | 4.36e-01 | 98.6% | 87.7% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 42.0 | 2.87e-01 | 94.3% | 25.0% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.50 | 42.0 | 3.66e-01 | 95.7% | 85.6% |
| 1wp0A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 42.0 | 3.36e-01 | 100.0% | 65.6% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927759 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.94 | 84.0 | 6.14e-01 | 98.6% | 40.6% |
| 4986012 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.92 | 80.0 | 5.48e-01 | 97.1% | 30.5% |
| 4983992 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.92 | 81.0 | 6.03e-01 | 98.6% | 41.9% |
| 5078403 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.91 | 81.0 | 7.89e-01 | 98.6% | 88.0% |
| 4965714 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.91 | 78.0 | 7.11e-01 | 100.0% | 71.1% |
| 5017942 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.91 | 79.0 | 6.91e-01 | 98.6% | 65.0% |
| 4967969 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.91 | 79.0 | 5.83e-01 | 98.6% | 39.4% |
| 4585912 | 101.1.2.603 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 | 0.90 | 82.0 | 5.02e-01 | 98.6% | 18.1% |
| 4979485 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.90 | 79.0 | 7.74e-01 | 98.6% | 86.7% |
| 5071263 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 81.0 | 7.37e-01 | 100.0% | 74.4% |
| 5035685 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.90 | 85.0 | 6.80e-01 | 100.0% | 59.7% |
| 4948474 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 82.0 | 8.23e-01 | 100.0% | 97.1% |
| 4964954 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.89 | 79.0 | 6.29e-01 | 98.6% | 51.6% |
| 4097415 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.89 | 80.0 | 8.04e-01 | 100.0% | 95.7% |
| 4999154 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.89 | 78.0 | 7.26e-01 | 100.0% | 77.6% |
| 5044327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 81.0 | 7.07e-01 | 100.0% | 68.0% |
| 4947441 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 76.0 | 7.11e-01 | 98.6% | 76.5% |
| 4998031 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.88 | 77.0 | 5.57e-01 | 98.6% | 37.6% |
| 4949226 | 101.1.2.892 ↗ | alpha arrays › HTH › HTH › winged helix domain › ArsR | 0.88 | 74.0 | 5.51e-01 | 98.6% | 39.4% |
| 4959599 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.88 | 82.0 | 6.80e-01 | 100.0% | 64.9% |
| 4545670 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.88 | 81.0 | 7.06e-01 | 98.6% | 77.8% |
| 4983310 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.87 | 77.0 | 6.74e-01 | 98.6% | 66.0% |
| 3604578 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.87 | 76.0 | 6.58e-01 | 100.0% | 62.9% |
| 5014942 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 79.0 | 8.02e-01 | 95.7% | 98.5% |
| 5031648 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.87 | 76.0 | 5.65e-01 | 100.0% | 40.0% |
| 4239635 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.87 | 80.0 | 5.90e-01 | 100.0% | 41.8% |
| 2391543 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.87 | 81.0 | 5.67e-01 | 100.0% | 37.6% |
| 164542 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.87 | 81.0 | 6.70e-01 | 100.0% | 63.5% |
| 4467359 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.87 | 78.0 | 5.74e-01 | 100.0% | 40.0% |
| 4401786 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.87 | 76.0 | 6.54e-01 | 100.0% | 62.9% |
| 5073878 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 75.0 | 7.50e-01 | 98.6% | 92.9% |
| 4646072 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.86 | 75.0 | 5.55e-01 | 100.0% | 38.8% |
| 4976773 | 101.1.2.275 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF1495 | 0.86 | 76.0 | 6.41e-01 | 98.6% | 60.0% |
| 4950547 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.86 | 74.0 | 6.64e-01 | 98.6% | 68.4% |
| 4930596 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.86 | 74.0 | 5.47e-01 | 98.6% | 38.2% |
| 5054122 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.86 | 74.0 | 5.55e-01 | 98.6% | 40.6% |
| 4403519 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 79.0 | 5.78e-01 | 100.0% | 40.6% |
| 3958859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 77.0 | 7.37e-01 | 100.0% | 85.0% |
| 4941287 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.85 | 76.0 | 6.94e-01 | 100.0% | 74.4% |
| 5039984 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.85 | 78.0 | 5.76e-01 | 100.0% | 41.8% |
| 2730 | 101.1.2.59 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF480 | 0.85 | 77.0 | 7.20e-01 | 98.6% | 81.0% |
| 5028348 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.85 | 77.0 | 5.47e-01 | 100.0% | 35.4% |
| 4993652 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.85 | 74.0 | 5.42e-01 | 98.6% | 37.7% |
| 3495862 | 101.1.2.383 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_69 | 0.85 | 76.0 | 6.66e-01 | 100.0% | 68.0% |
| 4466102 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.85 | 74.0 | 5.46e-01 | 100.0% | 38.8% |
| 4645846 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.84 | 74.0 | 5.44e-01 | 100.0% | 38.8% |
| 5070883 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.84 | 77.0 | 7.03e-01 | 100.0% | 76.7% |
| 3549847 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.84 | 77.0 | 4.74e-01 | 100.0% | 21.6% |
| 4527101 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.84 | 77.0 | 5.78e-01 | 100.0% | 43.8% |
| 4965874 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.84 | 78.0 | 6.15e-01 | 100.0% | 52.2% |
| 4998580 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 73.0 | 6.68e-01 | 100.0% | 73.3% |
| 5011653 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.83 | 74.0 | 6.28e-01 | 98.6% | 60.9% |
| 4947925 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 71.0 | 5.35e-01 | 100.0% | 39.9% |
| 4344487 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.83 | 69.0 | 5.17e-01 | 100.0% | 38.2% |
| 5036586 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 76.0 | 7.07e-01 | 98.6% | 81.2% |
| 4438513 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.83 | 75.0 | 6.37e-01 | 100.0% | 62.7% |
| 4478999 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.83 | 72.0 | 5.29e-01 | 98.6% | 38.2% |
| 4995062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 76.0 | 6.85e-01 | 100.0% | 75.6% |
| 4970576 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.83 | 75.0 | 5.45e-01 | 100.0% | 38.3% |
| 3667109 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.83 | 74.0 | 6.10e-01 | 100.0% | 72.8% |
| 5029277 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.83 | 76.0 | 6.56e-01 | 100.0% | 66.7% |
| 4507638 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.82 | 69.0 | 5.12e-01 | 100.0% | 38.2% |
| 4456198 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 76.0 | 5.45e-01 | 100.0% | 37.8% |
| 5075111 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.82 | 71.0 | 5.55e-01 | 98.6% | 45.8% |
| 3840298 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.82 | 75.0 | 6.01e-01 | 100.0% | 62.3% |
| 5042462 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.82 | 73.0 | 5.42e-01 | 100.0% | 41.2% |
| 4561147 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.82 | 68.0 | 5.55e-01 | 100.0% | 50.0% |
| 5069274 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.81 | 74.0 | 6.22e-01 | 100.0% | 60.9% |
| 5052491 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.81 | 74.0 | 5.33e-01 | 100.0% | 46.3% |
| 5041543 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.81 | 74.0 | 5.80e-01 | 100.0% | 50.0% |
| 4981949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 69.0 | 6.57e-01 | 94.3% | 81.2% |
| 4944702 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 73.0 | 5.69e-01 | 100.0% | 49.3% |
| 4985036 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.80 | 73.0 | 5.35e-01 | 100.0% | 40.6% |
| 5022036 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 73.0 | 5.79e-01 | 100.0% | 51.9% |
| 5025618 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 73.0 | 6.20e-01 | 100.0% | 63.6% |
| 4997255 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 71.0 | 6.28e-01 | 98.6% | 71.0% |
| 5033035 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 73.0 | 6.03e-01 | 100.0% | 59.3% |
| 5055444 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.79 | 71.0 | 6.19e-01 | 100.0% | 67.0% |
| 5003874 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.79 | 70.0 | 5.86e-01 | 98.6% | 68.3% |
| 3784227 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.79 | 71.0 | 6.61e-01 | 98.6% | 80.0% |
| 5026539 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 72.0 | 6.57e-01 | 100.0% | 78.9% |
| 3330019 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.79 | 72.0 | 6.07e-01 | 100.0% | 63.5% |
| 4974744 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.79 | 72.0 | 5.26e-01 | 100.0% | 39.4% |
| 4026870 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.79 | 72.0 | 6.12e-01 | 100.0% | 80.9% |
| 5011468 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.78 | 67.0 | 5.52e-01 | 98.6% | 52.8% |
| 4943395 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 71.0 | 5.28e-01 | 100.0% | 41.2% |
| 4974447 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 71.0 | 5.85e-01 | 100.0% | 58.3% |
| 5007541 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.78 | 69.0 | 5.96e-01 | 100.0% | 64.8% |
| 3574282 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.77 | 67.0 | 5.71e-01 | 100.0% | 60.9% |
| 3735293 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.77 | 69.0 | 4.61e-01 | 100.0% | 32.7% |
| 4221024 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 70.0 | 4.91e-01 | 100.0% | 49.3% |
| 5049515 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.76 | 68.0 | 5.79e-01 | 100.0% | 68.7% |
| 3467443 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.76 | 68.0 | 5.70e-01 | 100.0% | 60.0% |
| 5032906 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.76 | 66.0 | 5.28e-01 | 98.6% | 53.6% |
| 4950418 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 60.0 | 6.36e-01 | 98.6% | 100.0% |
| 4961841 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.73 | 63.0 | 5.24e-01 | 100.0% | 63.1% |
| 3387398 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 63.0 | 6.38e-01 | 97.1% | 100.0% |
| 4017201 | 101.1.2.33 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_beta | 0.71 | 64.0 | 6.28e-01 | 100.0% | 97.3% |
| 3989015 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 63.0 | 5.51e-01 | 98.6% | 65.7% |
| 3187043 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 64.0 | 5.88e-01 | 100.0% | 92.2% |
D2
medium
residues 1-35
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dxuA03 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.84 | 68.0 | 4.26e-01 | 94.3% | 17.7% |
| 1go3F02 | 6.10.140.10 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 60.0 | 5.55e-01 | 97.1% | 72.3% |
| 5lb3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 51.0 | 3.10e-01 | 85.7% | 11.0% |
| 3ljkA03 | 1.10.1390.10 | Mainly Alpha › Orthogonal Bundle › Phosphoglucose isomerase, C-terminal domain › | 0.72 | 50.0 | 4.89e-01 | 77.1% | 66.7% |
| 2p0vA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.71 | 58.0 | 3.31e-01 | 100.0% | 8.4% |
| 5mmjb02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 59.0 | 5.23e-01 | 97.1% | 76.9% |
| 3dkqA02 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.70 | 55.0 | 5.21e-01 | 100.0% | 74.5% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.69 | 53.0 | 4.92e-01 | 100.0% | 66.0% |
| 5ejrA01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.68 | 52.0 | 3.33e-01 | 100.0% | 16.9% |
| 3c8zA02 | 1.20.120.640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.65 | 52.0 | 4.13e-01 | 100.0% | 43.4% |
| 2gf2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 51.0 | 3.65e-01 | 100.0% | 26.9% |
| 1ffyA03 | 1.10.730.20 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › | 0.63 | 49.0 | 3.02e-01 | 100.0% | 12.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3452409 | 375.1.1.261 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF30610 | 0.98 | 91.0 | 8.23e-01 | 100.0% | 77.8% |
| 5040510 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.88 | 75.0 | 4.47e-01 | 100.0% | 14.3% |
| 3967314 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.73 | 59.0 | 3.77e-01 | 91.4% | 21.8% |
| 3435472 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.73 | 61.0 | 5.13e-01 | 100.0% | 53.8% |
| 4981549 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.72 | 59.0 | 4.39e-01 | 100.0% | 64.0% |
| 3721864 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.71 | 56.0 | 4.87e-01 | 100.0% | 55.4% |
| 4076265 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.67 | 55.0 | 5.04e-01 | 100.0% | 72.0% |
D3
medium
residues 127-211
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6umqA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.76 | 60.0 | 5.40e-01 | 83.5% | 95.7% |
| 2j82A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.74 | 52.0 | 3.81e-01 | 90.6% | 28.1% |
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.72 | 56.0 | 5.59e-01 | 92.9% | 79.8% |
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 48.0 | 5.35e-01 | 78.8% | 87.9% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.71 | 60.0 | 5.90e-01 | 94.1% | 98.9% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.68 | 47.0 | 4.10e-01 | 78.8% | 48.4% |
| 6h5hA00 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.67 | 47.0 | 5.05e-01 | 83.5% | 85.9% |
| 2wbiB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.66 | 52.0 | 4.22e-01 | 83.5% | 58.9% |
| 1q0gA00 | 1.20.120.400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase | 0.66 | 51.0 | 4.63e-01 | 89.4% | 60.7% |
| 2mabA00 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.64 | 42.0 | 3.92e-01 | 77.6% | 52.3% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 48.0 | 4.97e-01 | 90.6% | 86.4% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.63 | 54.0 | 4.52e-01 | 96.5% | 54.9% |
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.63 | 53.0 | 5.01e-01 | 94.1% | 91.3% |
| 1b68A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.63 | 53.0 | 4.56e-01 | 94.1% | 75.4% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.62 | 47.0 | 4.05e-01 | 80.0% | 71.4% |
| 3buxB01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.62 | 49.0 | 4.25e-01 | 84.7% | 86.0% |
| 1u00A02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 47.0 | 4.55e-01 | 89.4% | 72.9% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.61 | 49.0 | 4.29e-01 | 90.6% | 56.4% |
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.61 | 49.0 | 4.85e-01 | 97.6% | 81.3% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.61 | 47.0 | 4.76e-01 | 85.9% | 88.5% |
| 3rlfF01 | 1.20.58.370 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like | 0.60 | 51.0 | 5.09e-01 | 98.8% | 93.0% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.60 | 47.0 | 4.27e-01 | 88.2% | 78.2% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.60 | 49.0 | 4.15e-01 | 90.6% | 58.8% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.60 | 52.0 | 4.31e-01 | 95.3% | 59.6% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.60 | 45.0 | 4.91e-01 | 89.4% | 100.0% |
| 4cc9B00 | 1.20.5.4730 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 44.0 | 4.23e-01 | 91.8% | 67.3% |
| 1dkxA02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 44.0 | 4.56e-01 | 89.4% | 86.3% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.59 | 47.0 | 4.41e-01 | 90.6% | 68.2% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.59 | 48.0 | 4.31e-01 | 94.1% | 69.2% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.59 | 44.0 | 4.61e-01 | 85.9% | 89.5% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 42.0 | 4.41e-01 | 85.9% | 89.2% |
| 6fmhB01 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.56 | 48.0 | 3.89e-01 | 96.5% | 88.4% |
| 8e9gJ01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.55 | 49.0 | 3.91e-01 | 96.5% | 69.5% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.55 | 39.0 | 3.87e-01 | 75.3% | 78.0% |
| 2lwxA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.54 | 42.0 | 4.22e-01 | 87.1% | 100.0% |
| 1gvnA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 44.0 | 4.42e-01 | 94.1% | 96.6% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.52 | 39.0 | 3.66e-01 | 81.2% | 95.3% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.52 | 46.0 | 4.11e-01 | 97.6% | 100.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589064 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.69 | 56.0 | 4.17e-01 | 88.2% | 41.4% |
| 4823728 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 54.0 | 5.05e-01 | 84.7% | 89.4% |
| 4999397 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.68 | 62.0 | 4.63e-01 | 98.8% | 85.5% |
| 4237257 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.68 | 56.0 | 5.54e-01 | 90.6% | 88.9% |
| 3602692 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.67 | 61.0 | 4.43e-01 | 100.0% | 80.0% |
| 5030066 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.67 | 57.0 | 4.53e-01 | 96.5% | 87.2% |
| 4033601 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.66 | 56.0 | 5.45e-01 | 92.9% | 100.0% |
| 3989179 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.66 | 60.0 | 4.41e-01 | 100.0% | 79.6% |
| 3447636 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.65 | 59.0 | 4.19e-01 | 98.8% | 76.8% |
| 4945875 | 1076.1.1.0 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related | 0.65 | 57.0 | 4.13e-01 | 100.0% | 98.8% |
| 3455330 | 632.15.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 | 0.65 | 49.0 | 5.17e-01 | 89.4% | 92.0% |
| 4993688 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.65 | 47.0 | 4.60e-01 | 87.1% | 68.4% |
| 3471392 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.65 | 58.0 | 3.63e-01 | 100.0% | 38.5% |
| 4958181 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.64 | 56.0 | 4.28e-01 | 100.0% | 81.0% |
| 5065168 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.63 | 57.0 | 4.36e-01 | 97.6% | 84.9% |
| 4360723 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.63 | 47.0 | 4.62e-01 | 85.9% | 75.6% |
| 3808173 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.62 | 49.0 | 5.11e-01 | 94.1% | 97.3% |
| 3672278 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.62 | 48.0 | 4.64e-01 | 90.6% | 73.0% |
| 4842303 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 50.0 | 3.77e-01 | 88.2% | 48.5% |
| 3338586 | 632.1.1.12 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › GAUT_1 | 0.62 | 48.0 | 4.74e-01 | 84.7% | 87.8% |
| 4181278 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.61 | 47.0 | 4.95e-01 | 89.4% | 93.3% |
| 5044025 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.61 | 48.0 | 4.80e-01 | 85.9% | 90.6% |
| 3464709 | 632.15.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › GAUT_1 | 0.61 | 47.0 | 4.54e-01 | 84.7% | 77.0% |
| 5008556 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.61 | 50.0 | 5.09e-01 | 97.6% | 95.3% |
| 3203017 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.61 | 48.0 | 4.49e-01 | 85.9% | 70.5% |
| 4564470 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.60 | 50.0 | 4.73e-01 | 90.6% | 77.0% |
| 4997360 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 53.0 | 3.89e-01 | 98.8% | 53.0% |
| 4240705 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.59 | 50.0 | 5.05e-01 | 94.1% | 98.8% |
| 3258488 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 42.0 | 3.96e-01 | 74.1% | 97.0% |
| 3278993 | 192.29.1.247 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF27157 | 0.59 | 50.0 | 4.58e-01 | 94.1% | 71.7% |
| 4994506 | 8001.1.1.3 ↗ | alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PF27234 | 0.58 | 46.0 | 4.51e-01 | 88.2% | 90.5% |
| 4494216 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.58 | 47.0 | 4.43e-01 | 89.4% | 73.3% |
| 3952765 | 192.29.1.179 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF26307 | 0.58 | 49.0 | 4.25e-01 | 98.8% | 83.4% |
| 5041920 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.58 | 45.0 | 4.43e-01 | 84.7% | 84.4% |
| 3600055 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.57 | 49.0 | 4.39e-01 | 98.8% | 83.2% |
| 5001019 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.57 | 47.0 | 3.85e-01 | 94.1% | 84.7% |
| 5009337 | 3579.1.1.1 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › Oxidored_q3 | 0.55 | 48.0 | 3.88e-01 | 95.3% | 68.1% |
| 3275929 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 47.0 | 4.10e-01 | 96.5% | 86.9% |
| 3433406 | 5086.1.1.148 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF679 | 0.54 | 47.0 | 4.74e-01 | 100.0% | 97.6% |
| 3283349 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.53 | 43.0 | 3.86e-01 | 91.8% | 81.6% |
| 5064698 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 46.0 | 4.51e-01 | 96.5% | 95.6% |
| 3653618 | 5069.1.3.69 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › ETR1_N | 0.52 | 45.0 | 4.36e-01 | 95.3% | 97.9% |
| 3894479 | 5057.1.1.13 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Strabismus | 0.51 | 45.0 | 3.91e-01 | 100.0% | 81.5% |
| 1758759 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.51 | 42.0 | 3.20e-01 | 95.3% | 36.4% |
| 4025124 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.50 | 42.0 | 3.55e-01 | 91.8% | 89.7% |