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KY065464.1__APD22369.1__IPP23_00028__00028
Bact-VirKY065464.1__APD22369.1__IPP23_00028__00028
Identity
- Accession:
- KY065464 ↗
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-61
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fvzA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.73 | 56.0 | 3.42e-01 | 86.0% | 62.6% |
| 3h5eA00 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.72 | 48.0 | 3.39e-01 | 70.0% | 97.4% |
| 2qc5A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.72 | 54.0 | 3.34e-01 | 84.0% | 57.7% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.71 | 39.0 | 3.21e-01 | 72.0% | 28.6% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 53.0 | 3.28e-01 | 84.0% | 61.3% |
| 3dasA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 55.0 | 3.32e-01 | 88.0% | 35.6% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.66 | 51.0 | 3.00e-01 | 86.0% | 72.5% |
| 1bxoA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.64 | 51.0 | 3.62e-01 | 92.0% | 80.0% |
| 3e5zA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.63 | 48.0 | 3.02e-01 | 86.0% | 75.2% |
| 1pjxA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.62 | 51.0 | 3.21e-01 | 100.0% | 26.4% |
| 3v9fA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 53.0 | 3.26e-01 | 100.0% | 22.5% |
| 4lrzE02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 48.0 | 4.02e-01 | 92.0% | 88.3% |
| 1wxcB01 | 3.30.1880.10 | Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like | 0.59 | 50.0 | 4.68e-01 | 96.0% | 87.1% |
| 4gs5A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.59 | 46.0 | 2.99e-01 | 92.0% | 18.0% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 45.0 | 4.09e-01 | 84.0% | 86.4% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.56 | 47.0 | 4.08e-01 | 96.0% | 62.0% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 39.0 | 2.35e-01 | 84.0% | 22.5% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 2.95e-01 | 98.0% | 36.3% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 39.0 | 3.24e-01 | 88.0% | 84.6% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 45.0 | 3.53e-01 | 100.0% | 67.6% |
| 3rlfF02 | 3.10.650.10 | Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like | 0.51 | 35.0 | 3.03e-01 | 70.0% | 45.1% |
| 1vwxg01 | 6.20.370.70 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.51 | 33.0 | 3.58e-01 | 98.0% | 91.9% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3493520 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.71 | 56.0 | 4.33e-01 | 100.0% | 38.3% |
| 5025277 | 284.1.1.13 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP-like_N | 0.68 | 52.0 | 5.11e-01 | 96.0% | 78.2% |
| 4944535 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.65 | 57.0 | 3.54e-01 | 100.0% | 85.5% |
| 4991580 | 3124.1.1.0 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain | 0.65 | 43.0 | 4.35e-01 | 70.0% | 78.0% |
| 5003963 | 5.1.11.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A | 0.64 | 57.0 | 3.33e-01 | 100.0% | 12.5% |
| 4446243 | 4011.1.1.0 ↗ | beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins | 0.63 | 50.0 | 4.31e-01 | 92.0% | 95.3% |
| 3405890 | 5.1.3.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP | 0.61 | 53.0 | 3.24e-01 | 100.0% | 28.9% |
| 4101649 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.61 | 42.0 | 2.69e-01 | 94.0% | 14.2% |
| 3827853 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.60 | 46.0 | 2.95e-01 | 88.0% | 17.0% |
| 3962065 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.60 | 52.0 | 3.34e-01 | 100.0% | 28.8% |
| 3685569 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.60 | 44.0 | 3.52e-01 | 84.0% | 54.8% |
| 3988067 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 3.58e-01 | 74.0% | 91.8% |
| None | — | 0.59 | 46.0 | 2.95e-01 | 90.0% | 17.1% | |
| None | — | 0.58 | 44.0 | 2.87e-01 | 90.0% | 17.1% | |
| 3565241 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 48.0 | 2.91e-01 | 100.0% | 20.8% |
| 3665072 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.58 | 45.0 | 2.76e-01 | 90.0% | 14.0% |
| 3617983 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 48.0 | 2.81e-01 | 94.0% | 76.3% |
| 135088 | 241.3.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N domain of copper amine oxidase › N domain of copper amine oxidase › Cu_amine_oxidN1 | 0.56 | 47.0 | 3.98e-01 | 96.0% | 57.0% |
| 3331615 | 7579.1.1.124 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH, Hydrolase_4 | 0.55 | 42.0 | 2.73e-01 | 90.0% | 16.7% |
| 5080093 | 5.1.5.232 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Reg_prop | 0.52 | 47.0 | 2.59e-01 | 100.0% | 91.8% |
| 3411588 | 4.12.1.1 ↗ | beta barrels › SH3 › Methuselah ectodomain › Methuselah ectodomain › Methuselah_N | 0.51 | 41.0 | 3.31e-01 | 100.0% | 71.3% |
| 3691862 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.50 | 38.0 | 2.49e-01 | 92.0% | 43.2% |