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KY249644.1__ARB05705.1__X__00022

Bact-Vir

KY249644.1__ARB05705.1__X__00022

Identity

Accession:
KY249644 ↗
Kingdom:
phage

Quality

68.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casjensviridae› Sessunavirus› Synechococcus_virus_S-ESS1

TaxID: 1964565

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-175
PDB
D2 high residues 181-270
PDB
D3 medium residues 293-426
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00959.25 best Phage_lysozyme 24.8 3.10e-05 85.1% 52.0%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hdeC00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.84 71.0 6.53e-01 92.5% 71.3%
4aqnA02 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.79 71.0 6.24e-01 95.5% 80.8%
8b2sA01 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.76 67.0 6.38e-01 93.3% 82.5%
152lA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.70 62.0 5.77e-01 94.8% 82.9%
1grlB01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.53 47.0 3.92e-01 98.5% 77.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3511212 606.1.1.3 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › DEDD_Tnp_IS110 0.61 39.0 3.83e-01 79.9% 58.6%
3292512 150.1.1.2 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › AOX 0.55 44.0 3.57e-01 85.8% 88.8%
3508265 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.53 45.0 3.32e-01 93.3% 83.5%