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KY250482.1__APQ42515.1__phi16_gp010__00010
Bact-VirKY250482.1__APQ42515.1__phi16_gp010__00010
Identity
- Accession:
- KY250482 ↗
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Cluster
View cluster (247 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-107
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.81 | 48.0 | 6.14e-01 | 99.0% | 98.4% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.69 | 44.0 | 4.53e-01 | 100.0% | 67.6% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.67 | 49.0 | 5.55e-01 | 99.0% | 100.0% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 35.0 | 4.10e-01 | 78.1% | 73.2% |
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.66 | 59.0 | 5.75e-01 | 100.0% | 90.2% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.61 | 56.0 | 5.47e-01 | 100.0% | 92.2% |
| 3dfjA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 46.0 | 4.57e-01 | 100.0% | 75.2% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.60 | 51.0 | 5.04e-01 | 100.0% | 89.0% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 43.0 | 4.45e-01 | 93.3% | 78.2% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 44.0 | 4.34e-01 | 79.0% | 79.1% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 38.0 | 4.13e-01 | 99.0% | 84.3% |
| 3e19B01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.55 | 28.0 | 3.49e-01 | 100.0% | 79.7% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 48.0 | 4.37e-01 | 100.0% | 85.2% |
| 1flmA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 47.0 | 4.48e-01 | 100.0% | 82.8% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.52 | 46.0 | 4.21e-01 | 100.0% | 92.2% |
| 2o30A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 34.0 | 3.82e-01 | 100.0% | 86.6% |
| 2rovA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 33.0 | 3.19e-01 | 99.0% | 58.1% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 25.0 | 3.18e-01 | 100.0% | 79.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.83 | 54.0 | 5.71e-01 | 100.0% | 73.7% |
| 4157526 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.83 | 48.0 | 4.67e-01 | 100.0% | 53.0% |
| 3975275 | 1.1.13.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 | 0.74 | 49.0 | 5.18e-01 | 100.0% | 74.7% |
| 4316037 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.74 | 51.0 | 5.07e-01 | 100.0% | 68.2% |
| 4318415 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 49.0 | 5.16e-01 | 100.0% | 76.8% |
| 185291 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.68 | 50.0 | 5.63e-01 | 100.0% | 100.0% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.68 | 60.0 | 6.03e-01 | 100.0% | 94.3% |
| 3587815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 58.0 | 5.85e-01 | 100.0% | 93.3% |
| 4669352 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 56.0 | 5.50e-01 | 100.0% | 84.5% |
| 4988096 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 61.0 | 5.95e-01 | 100.0% | 97.4% |
| 3511361 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 43.0 | 5.02e-01 | 77.1% | 100.0% |
| 5003311 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 59.0 | 5.85e-01 | 100.0% | 97.3% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 59.0 | 5.83e-01 | 100.0% | 97.2% |
| 4525110 | 1.1.13.65 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Mycop_pep_DUF31 | 0.61 | 54.0 | 4.92e-01 | 97.1% | 90.0% |
| 169594 | 1.1.13.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 | 0.61 | 56.0 | 5.47e-01 | 100.0% | 92.2% |
| 119197 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.60 | 51.0 | 5.04e-01 | 100.0% | 89.0% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.59 | 52.0 | 5.24e-01 | 97.1% | 100.0% |
| 3813465 | 11.1.1.855 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26102 | 0.57 | 39.0 | 3.80e-01 | 77.1% | 63.5% |
| 4949072 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 50.0 | 4.52e-01 | 100.0% | 71.0% |
| 3297237 | 11.1.1.855 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26102 | 0.54 | 35.0 | 3.02e-01 | 76.2% | 38.9% |
| 3469917 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.53 | 36.0 | 3.83e-01 | 77.1% | 77.9% |
| 3509647 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.52 | 46.0 | 3.32e-01 | 100.0% | 73.3% |
| 3865742 | 319.1.1.12 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS_DNAAF11_C | 0.51 | 37.0 | 4.05e-01 | 99.0% | 95.3% |