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KY250482.1__APQ42542.1__phi16_gp039__00039
Bact-VirKY250482.1__APQ42542.1__phi16_gp039__00039
Identity
- Accession:
- KY250482 ↗
- Kingdom:
- phage
Quality
77.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-45
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7oode01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.75 | 50.0 | 4.25e-01 | 92.9% | 42.6% |
| 1pjqA02 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.71 | 38.0 | 4.09e-01 | 97.6% | 55.6% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.69 | 59.0 | 3.99e-01 | 100.0% | 44.4% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.68 | 60.0 | 4.55e-01 | 97.6% | 78.9% |
| 3c1dB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 4.52e-01 | 83.3% | 56.5% |
| 1yf2A02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.67 | 55.0 | 4.21e-01 | 97.6% | 45.8% |
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.66 | 45.0 | 2.96e-01 | 71.4% | 97.3% |
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.66 | 48.0 | 3.38e-01 | 95.2% | 22.9% |
| 1t3uA01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.66 | 58.0 | 5.81e-01 | 100.0% | 95.3% |
| 5wzoA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.64 | 55.0 | 3.77e-01 | 97.6% | 30.9% |
| 2bh7A02 | 3.40.80.10 | Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like | 0.63 | 44.0 | 3.05e-01 | 90.5% | 21.1% |
| 7yj5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.62 | 45.0 | 3.21e-01 | 95.2% | 23.2% |
| 1u0mA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.62 | 47.0 | 3.35e-01 | 92.9% | 26.0% |
| 2h84A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.61 | 46.0 | 3.36e-01 | 95.2% | 27.7% |
| 3aleA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.60 | 45.0 | 3.22e-01 | 90.5% | 25.9% |
| 7vjvA01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.59 | 42.0 | 2.73e-01 | 73.8% | 21.7% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 46.0 | 3.15e-01 | 88.1% | 37.9% |
| 3gr3A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 50.0 | 3.09e-01 | 95.2% | 38.1% |
| 7febA03 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.57 | 42.0 | 3.35e-01 | 81.0% | 37.0% |
| 2dcfA03 | 1.20.58.710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 40.0 | 3.05e-01 | 90.5% | 52.9% |
| 1pmtA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 39.0 | 3.04e-01 | 85.7% | 79.8% |
| 7oslA02 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.50 | 39.0 | 3.01e-01 | 88.1% | 81.0% |
| 2pjhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 34.0 | 2.83e-01 | 71.4% | 42.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3575264 | 604.12.1.61 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Clc-like | 0.80 | 57.0 | 4.09e-01 | 97.6% | 27.8% |
| 3530014 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.75 | 62.0 | 3.40e-01 | 95.2% | 59.4% |
| 3531310 | 109.4.1.574 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NOC3p | 0.74 | 57.0 | 3.51e-01 | 97.6% | 14.9% |
| 4978597 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.69 | 64.0 | 4.05e-01 | 100.0% | 48.1% |
| 3970206 | 857.1.1.0 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like | 0.67 | 60.0 | 5.13e-01 | 100.0% | 63.1% |
| 3415216 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.60 | 49.0 | 3.47e-01 | 100.0% | 30.8% |