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KY250482.1__APQ42563.1__phi16_gp060__00060
Bact-VirKY250482.1__APQ42563.1__phi16_gp060__00060
Identity
- Accession:
- KY250482 ↗
- Kingdom:
- phage
Quality
88.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-98
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 51.0 | 6.06e-01 | 74.7% | 100.0% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 47.0 | 5.44e-01 | 77.9% | 100.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 48.0 | 5.42e-01 | 72.6% | 95.8% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 47.0 | 5.30e-01 | 91.6% | 100.0% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.65 | 46.0 | 3.95e-01 | 73.7% | 64.4% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 46.0 | 5.20e-01 | 95.8% | 100.0% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 41.0 | 4.78e-01 | 70.5% | 92.6% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 45.0 | 5.03e-01 | 89.5% | 100.0% |
| 1r4kA01 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.61 | 47.0 | 4.24e-01 | 82.1% | 95.5% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.59 | 44.0 | 4.48e-01 | 80.0% | 95.8% |
| 2db9A01 | 3.90.70.200 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain | 0.57 | 51.0 | 4.61e-01 | 100.0% | 94.7% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 32.0 | 3.27e-01 | 71.6% | 53.6% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.56 | 38.0 | 3.86e-01 | 81.1% | 71.4% |
| 1ug1A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 37.0 | 3.81e-01 | 71.6% | 71.7% |
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.54 | 39.0 | 3.51e-01 | 75.8% | 92.6% |
| 6ijfC01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.54 | 36.0 | 3.69e-01 | 81.1% | 69.9% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 37.0 | 3.57e-01 | 71.6% | 89.7% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 36.0 | 4.13e-01 | 97.9% | 100.0% |
| 2nysA00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.52 | 44.0 | 4.17e-01 | 95.8% | 84.6% |
| 1gsaA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 34.0 | 3.91e-01 | 78.9% | 96.9% |
| 2f91A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 35.0 | 3.36e-01 | 70.5% | 80.5% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.51 | 40.0 | 3.90e-01 | 84.2% | 99.0% |
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 36.0 | 3.43e-01 | 73.7% | 88.7% |
| 1rerA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.51 | 38.0 | 3.50e-01 | 80.0% | 98.4% |
| 2k50A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 36.0 | 3.54e-01 | 75.8% | 99.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948467 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.76 | 51.0 | 6.01e-01 | 74.7% | 100.0% |
| 4037383 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.75 | 50.0 | 5.91e-01 | 76.8% | 100.0% |
| 3410370 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 51.0 | 5.85e-01 | 93.7% | 98.6% |
| 3713569 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 52.0 | 4.70e-01 | 75.8% | 65.4% |
| 3886492 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.71 | 51.0 | 5.65e-01 | 90.5% | 94.7% |
| 4660084 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 48.0 | 5.52e-01 | 77.9% | 97.1% |
| 3550699 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.70 | 49.0 | 4.91e-01 | 71.6% | 73.7% |
| 3573739 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.70 | 48.0 | 4.54e-01 | 71.6% | 77.4% |
| 3597347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 51.0 | 4.68e-01 | 75.8% | 76.7% |
| 3184389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 50.0 | 4.06e-01 | 74.7% | 53.1% |
| 3938484 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 51.0 | 4.73e-01 | 80.0% | 91.7% |
| 3347795 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.67 | 47.0 | 5.10e-01 | 75.8% | 87.5% |
| 5062120 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 51.0 | 4.99e-01 | 82.1% | 89.5% |
| 3616769 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.66 | 44.0 | 4.47e-01 | 77.9% | 68.4% |
| 3358748 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.65 | 47.0 | 5.07e-01 | 74.7% | 100.0% |
| 3517415 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.65 | 43.0 | 5.02e-01 | 75.8% | 98.5% |
| 3584555 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 45.0 | 5.13e-01 | 92.6% | 100.0% |
| 4966131 | 4.1.3.1 ↗ | beta barrels › SH3 › SH3 › Calcium-binding protein CcbP › Calci_bind_CcbP | 0.63 | 48.0 | 4.58e-01 | 92.6% | 69.1% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.63 | 48.0 | 4.45e-01 | 80.0% | 80.8% |
| 3416672 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 47.0 | 4.68e-01 | 80.0% | 76.0% |
| 3873627 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.61 | 44.0 | 4.14e-01 | 75.8% | 77.4% |
| 3441143 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.61 | 49.0 | 4.86e-01 | 95.8% | 82.0% |
| 3453083 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.59e-01 | 81.1% | 100.0% |
| 4229837 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.60 | 43.0 | 3.53e-01 | 75.8% | 48.1% |
| 3497683 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.60 | 44.0 | 3.83e-01 | 77.9% | 55.3% |
| 3540253 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.60 | 52.0 | 5.23e-01 | 96.8% | 97.9% |
| 4663234 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 43.0 | 4.44e-01 | 75.8% | 100.0% |
| 573 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.59 | 44.0 | 4.48e-01 | 80.0% | 95.8% |
| 3409460 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 4.36e-01 | 83.2% | 80.0% |
| 3687369 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.58 | 50.0 | 4.93e-01 | 93.7% | 95.0% |
| 3190995 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.57 | 48.0 | 3.95e-01 | 91.6% | 53.1% |
| 3493399 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 49.0 | 4.10e-01 | 94.7% | 83.6% |
| 4018672 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.57 | 47.0 | 4.47e-01 | 91.6% | 78.3% |
| 3908789 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.56 | 46.0 | 3.36e-01 | 92.6% | 49.5% |
| 3928985 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.55 | 39.0 | 4.04e-01 | 74.7% | 91.1% |
| 3264469 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.53 | 43.0 | 4.56e-01 | 92.6% | 97.6% |
| 3722811 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.53 | 41.0 | 3.84e-01 | 81.1% | 97.4% |
| 3500703 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.53 | 41.0 | 3.71e-01 | 84.2% | 100.0% |
| 4461780 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.52 | 37.0 | 3.04e-01 | 73.7% | 71.9% |
| 4383111 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.52 | 37.0 | 2.95e-01 | 73.7% | 70.2% |
| 4548389 | 219.1.1.39 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF1175 | 0.52 | 40.0 | 3.18e-01 | 85.3% | 46.2% |
| 3243417 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 37.0 | 3.32e-01 | 73.7% | 76.9% |
| 4226250 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.51 | 35.0 | 2.86e-01 | 72.6% | 63.5% |