Back to structures

KY271400.1__ARB15764.1__X__00022

Bact-Vir

KY271400.1__ARB15764.1__X__00022

Identity

Accession:
KY271400 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-244
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01904.25 best DUF72 162.5 2.10e-47 95.9% 94.5%
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vpyA00 3.20.20.410 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Protein of unknown function UPF0759 0.82 79.0 7.78e-01 100.0% 94.8%
1vpqA00 3.20.20.410 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Protein of unknown function UPF0759 0.80 76.0 7.35e-01 97.9% 90.0%
5xd7A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.74 55.0 5.69e-01 96.3% 78.9%
2nqlA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.74 57.0 5.96e-01 96.7% 85.9%
4m0xA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.74 57.0 5.81e-01 96.7% 81.3%
2oztA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.74 56.0 6.06e-01 96.7% 92.6%
2chrA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.73 57.0 6.18e-01 96.7% 95.0%
1n7kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.73 57.0 5.85e-01 96.7% 83.3%
2qddA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.73 55.0 5.57e-01 96.7% 78.2%
1dtnA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.72 54.0 5.55e-01 96.7% 80.0%
3ugvA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.72 55.0 5.65e-01 96.7% 80.5%
5diyA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.72 68.0 6.22e-01 99.2% 87.0%
2gdqA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.72 58.0 5.60e-01 96.7% 75.6%
4zxoA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.71 67.0 5.89e-01 100.0% 88.7%
6ktqA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 62.0 5.84e-01 100.0% 81.1%
2dskA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.68 64.0 5.91e-01 100.0% 92.3%
4g56A01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.68 63.0 6.01e-01 98.8% 93.5%
4aibA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.67 55.0 5.77e-01 100.0% 94.9%
3qyqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 62.0 5.90e-01 97.5% 87.2%
2nv9D02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.67 56.0 5.83e-01 100.0% 94.7%
3ua3B01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.66 61.0 5.83e-01 98.3% 91.8%
4g9pA01 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.66 62.0 5.83e-01 99.6% 86.4%
3edeA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 60.0 4.92e-01 95.9% 97.9%
4hjwA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.66 60.0 5.13e-01 96.7% 95.2%
7lsuA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 61.0 5.04e-01 99.6% 92.9%
2e8yA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 61.0 5.03e-01 100.0% 89.0%
2fhfA04 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 61.0 4.56e-01 100.0% 88.6%
3paoB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.65 61.0 5.57e-01 99.6% 97.8%
4e2oA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 61.0 5.31e-01 100.0% 90.2%
1gjwA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 61.0 4.56e-01 100.0% 79.0%
4gxwB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.65 61.0 5.23e-01 99.6% 90.4%
3zssA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 61.0 5.22e-01 100.0% 92.6%
4epkB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.64 59.0 5.25e-01 97.1% 96.4%
4aeeA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 60.0 5.42e-01 100.0% 82.1%
3r79A00 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.64 52.0 5.35e-01 97.1% 89.0%
3lgdA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.64 60.0 4.70e-01 99.6% 79.9%
3dhuA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 60.0 5.26e-01 100.0% 92.2%
4qtpD00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.64 30.0 4.25e-01 80.5% 92.2%
4cqbA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.64 58.0 5.38e-01 97.1% 96.7%
2ftpA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 58.0 5.34e-01 96.7% 87.3%
5macA02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.63 58.0 5.15e-01 97.1% 88.3%
6pwkA02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.63 52.0 5.34e-01 90.5% 90.0%
3hx3A02 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.60 37.0 4.26e-01 91.7% 81.3%
2ex2A02 3.50.80.20 Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 0.59 24.0 3.66e-01 82.6% 87.4%
2o3rA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 30.0 4.03e-01 80.9% 100.0%
4basA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 32.0 3.77e-01 83.0% 81.4%
1xv5A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 35.0 3.93e-01 84.2% 82.2%
2wteA01 3.40.50.11700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 27.0 3.45e-01 90.0% 81.9%
4g6uA02 3.40.1350.110 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.52 29.0 3.75e-01 97.5% 94.2%
5di3B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 36.0 3.89e-01 83.4% 84.3%
7zr3A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 3.83e-01 86.3% 81.2%
1b2rA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.50 32.0 3.79e-01 93.8% 91.6%
4r81C00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.50 34.0 3.75e-01 86.7% 83.8%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4007988 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.99 98.0 9.34e-01 100.0% 92.6%
3973051 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.96 94.0 8.83e-01 100.0% 86.8%
3288683 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.95 93.0 8.95e-01 100.0% 91.7%
5075132 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.89 79.0 7.88e-01 96.7% 89.0%
5025075 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.88 76.0 7.70e-01 99.2% 89.2%
5038923 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.87 79.0 7.75e-01 98.3% 87.5%
5000642 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.87 80.0 7.61e-01 100.0% 83.7%
4926829 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.87 71.0 7.37e-01 100.0% 89.3%
5049820 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.85 80.0 7.62e-01 100.0% 85.6%
4944897 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.85 80.0 7.49e-01 100.0% 81.8%
5027543 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.85 74.0 7.29e-01 98.3% 84.7%
5064190 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.85 76.0 7.79e-01 98.3% 95.7%
4952192 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.85 74.0 7.66e-01 100.0% 95.6%
5048892 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.85 77.0 7.48e-01 98.8% 86.5%
4974696 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.84 76.0 7.67e-01 99.2% 92.9%
3514132 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.83 78.0 7.56e-01 96.7% 96.5%
4030951 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.82 79.0 7.44e-01 100.0% 89.3%
283944 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.82 79.0 7.49e-01 100.0% 93.5%
5071603 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.82 73.0 7.18e-01 98.8% 87.5%
4996758 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.81 79.0 7.51e-01 100.0% 89.3%
3968896 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.81 78.0 7.11e-01 100.0% 87.2%
5013574 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.77 71.0 7.21e-01 97.9% 96.7%
5078065 2002.1.1.79 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 0.76 73.0 7.18e-01 100.0% 95.7%
1261187 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.73 57.0 5.96e-01 96.7% 86.8%
3785858 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.70 66.0 5.65e-01 100.0% 94.8%
3395515 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.70 65.0 6.23e-01 97.9% 94.8%
None 0.70 61.0 5.69e-01 100.0% 75.3%
3626021 2002.1.1.189 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM 0.69 65.0 5.96e-01 99.6% 92.8%
3477488 2002.1.1.189 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM 0.69 64.0 6.04e-01 98.8% 92.1%
5026485 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.67 63.0 5.79e-01 100.0% 88.7%
4565407 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.67 61.0 5.38e-01 98.3% 88.3%
3940699 2002.1.1.189 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM 0.66 62.0 5.71e-01 99.2% 89.7%
3199933 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.66 59.0 5.13e-01 100.0% 63.6%
3225872 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.65 60.0 5.68e-01 97.1% 90.7%
4141504 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.65 60.0 5.38e-01 98.3% 93.0%
None 0.65 61.0 5.29e-01 99.2% 88.7%
4060003 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.65 60.0 5.40e-01 98.3% 92.0%
989855 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.65 61.0 5.23e-01 99.6% 90.4%
4079413 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.65 60.0 5.31e-01 98.3% 91.6%
4116051 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.65 59.0 5.25e-01 98.3% 90.4%
3659127 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.64 60.0 5.23e-01 99.6% 88.2%
4683196 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.64 60.0 5.28e-01 99.2% 90.3%
3268198 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.64 60.0 5.17e-01 99.2% 85.8%
1169922 2002.1.1.4 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase 0.64 60.0 5.25e-01 100.0% 92.0%
5077514 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.59 45.0 4.81e-01 78.8% 94.8%
3452058 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 51.0 4.99e-01 97.1% 86.0%
3853982 2007.9.1.7 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › NPHP3 0.55 31.0 3.64e-01 86.7% 77.5%
4507166 2008.1.1.149 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30140 0.55 31.0 3.98e-01 95.9% 94.3%
5032325 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.55 38.0 4.28e-01 87.1% 91.4%
3515505 2004.1.1.534 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF30386 0.54 33.0 3.47e-01 86.7% 64.9%
4946606 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 36.0 4.18e-01 87.6% 93.7%
3255191 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 45.0 3.56e-01 90.9% 81.7%
3797120 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.51 34.0 3.84e-01 92.9% 85.9%
4021724 2007.15.1.4 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyri_tr2 0.50 32.0 3.77e-01 87.6% 90.9%