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KY290952.1__APU01177.1__X__00037

Bact-Vir

KY290952.1__APU01177.1__X__00037

Identity

Accession:
KY290952 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aeromonas_phage_32

TaxID: 1932899

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-56
PDB
Domain cluster: rep: ON470627.1__URC10669.1__X__00005__D2-54
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05489.19 best Phage_tail_X 39.5 4.70e-10 100.0% 80.0%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.83 68.0 7.03e-01 100.0% 97.8%
4b8vA03 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.82 66.0 6.69e-01 100.0% 91.8%
4b8vA02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.81 69.0 6.03e-01 100.0% 64.4%
2djpA00 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.72 57.0 5.00e-01 100.0% 58.4%
2ihyA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 53.0 3.50e-01 100.0% 26.2%
4bouA00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.65 48.0 3.57e-01 82.0% 49.6%
4bopB00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.65 48.0 3.49e-01 82.0% 45.3%
2oqrA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 3.91e-01 92.0% 64.5%
7osfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 47.0 3.32e-01 100.0% 31.6%
3hp7A01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.60 46.0 4.34e-01 90.0% 84.6%
1b9rA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.59 49.0 4.00e-01 100.0% 81.9%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.39e-01 94.0% 88.5%
6dx5A00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.58 46.0 3.30e-01 94.0% 65.7%
4g1uD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 45.0 3.03e-01 100.0% 27.2%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.12e-01 100.0% 93.9%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.54 41.0 3.14e-01 92.0% 52.5%
8a8gA01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.51 40.0 3.03e-01 92.0% 51.4%
1v47A01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.51 38.0 2.99e-01 90.0% 53.4%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3966498 101.15.1.3 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X 0.95 88.0 7.95e-01 100.0% 78.5%
1007201 101.15.1.3 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X 0.88 79.0 7.02e-01 100.0% 71.8%
3979943 101.15.1.3 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X 0.88 76.0 7.64e-01 96.0% 94.0%
4177991 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 73.0 7.13e-01 100.0% 85.5%
3691758 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.85 73.0 7.12e-01 100.0% 85.5%
3587382 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 74.0 7.18e-01 100.0% 87.3%
5004560 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 74.0 7.23e-01 100.0% 87.3%
4128043 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 70.0 7.28e-01 100.0% 100.0%
3186054 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 68.0 6.85e-01 100.0% 88.0%
4019982 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.83 70.0 6.60e-01 100.0% 78.3%
3898121 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 66.0 6.40e-01 100.0% 80.0%
3611431 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.82 74.0 6.99e-01 100.0% 85.0%
4069716 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.82 71.0 5.29e-01 100.0% 40.0%
3303205 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 70.0 6.55e-01 100.0% 78.3%
3636417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.81 69.0 6.76e-01 100.0% 88.7%
3166029 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.81 68.0 6.61e-01 100.0% 87.3%
3964929 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 63.0 6.54e-01 98.0% 95.6%
3666767 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.80 70.0 5.41e-01 100.0% 45.7%
3240632 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 62.0 6.44e-01 100.0% 93.3%
3636424 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 68.0 6.63e-01 100.0% 85.5%
3375189 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.80 69.0 6.18e-01 100.0% 68.6%
3517460 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 66.0 6.45e-01 100.0% 81.8%
3671032 101.15.1.11 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_NFP 0.80 69.0 4.73e-01 100.0% 29.1%
3925474 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 66.0 6.67e-01 100.0% 90.0%
4491522 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 64.0 6.09e-01 100.0% 75.0%
3651054 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.80 69.0 4.79e-01 100.0% 31.0%
3367888 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.80 72.0 6.38e-01 100.0% 71.4%
3306283 101.15.1.8 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_NFP 0.79 64.0 5.92e-01 100.0% 69.2%
2124918 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 68.0 4.92e-01 100.0% 35.3%
3670445 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 68.0 4.11e-01 100.0% 15.5%
3595402 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.79 62.0 6.50e-01 88.0% 95.6%
3417561 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 67.0 4.12e-01 100.0% 16.3%
3232962 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.78 64.0 6.04e-01 100.0% 75.0%
3269916 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 65.0 6.19e-01 100.0% 80.0%
4995817 101.15.1.4 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 0.77 67.0 6.07e-01 100.0% 72.9%
3248434 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 64.0 6.52e-01 100.0% 95.9%
4176074 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 67.0 6.39e-01 100.0% 86.7%
3969915 101.15.1.12 ↗ alpha arrays › HTH › LysM domain › LysM domain › PF30403 0.75 61.0 5.51e-01 100.0% 65.7%
3421939 101.15.1.9 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 0.74 63.0 4.73e-01 100.0% 38.4%
3261110 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.74 65.0 6.42e-01 100.0% 96.3%
4047213 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.74 65.0 6.35e-01 100.0% 90.9%
4678697 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.74 64.0 6.48e-01 98.0% 100.0%
3963519 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.73 65.0 5.97e-01 100.0% 76.9%
4447894 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.68 58.0 5.70e-01 96.0% 94.5%
3587989 221.1.2.5 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 0.68 57.0 5.36e-01 100.0% 89.2%
4278221 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.67 53.0 4.96e-01 90.0% 75.4%
3968457 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.65 55.0 4.71e-01 100.0% 57.6%
4946527 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 46.0 4.06e-01 78.0% 93.8%
4100484 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.61 45.0 4.49e-01 90.0% 90.9%
4251581 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.61 45.0 4.33e-01 90.0% 76.9%
4292036 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.59 46.0 4.46e-01 96.0% 88.3%
4375269 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.57 42.0 4.06e-01 92.0% 75.4%
3590624 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.55 43.0 3.92e-01 98.0% 90.0%