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KY368639.1__APZ82275.1__Goe2_c03500__00035

Bact-Vir

KY368639.1__APZ82275.1__Goe2_c03500__00035

Identity

Accession:
KY368639 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 44-97
PDB
CATH (92)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.79 72.0 4.98e-01 100.0% 48.2%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.76 67.0 4.45e-01 98.1% 27.4%
1o51A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 67.0 5.68e-01 100.0% 95.5%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.75 66.0 5.61e-01 98.1% 61.6%
7qh2C03 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 63.0 5.56e-01 100.0% 65.4%
4noiA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.74 65.0 5.26e-01 100.0% 62.1%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 59.0 5.01e-01 100.0% 53.3%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 63.0 4.19e-01 100.0% 40.2%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.72 64.0 5.06e-01 100.0% 61.1%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.34e-01 100.0% 79.1%
1yz7A02 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.72 63.0 5.33e-01 100.0% 63.3%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.71 61.0 5.51e-01 100.0% 69.3%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.71 62.0 5.28e-01 100.0% 60.7%
2ns6A00 3.30.930.30 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › 0.71 62.0 4.31e-01 100.0% 32.2%
3i24B00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.71 60.0 4.53e-01 100.0% 50.4%
2bvfA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.71 62.0 4.17e-01 100.0% 42.4%
2raaA00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.70 61.0 4.27e-01 100.0% 32.0%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 56.0 4.22e-01 100.0% 35.8%
4atnA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 60.0 4.21e-01 100.0% 46.2%
2oikA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.70 59.0 4.48e-01 100.0% 50.4%
3pm9A04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 61.0 5.23e-01 100.0% 62.1%
2jvzA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.69 61.0 5.37e-01 100.0% 70.0%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.69 60.0 4.51e-01 100.0% 64.0%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.69 59.0 5.10e-01 98.1% 64.0%
2axyA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.69 59.0 5.40e-01 100.0% 72.2%
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.68 55.0 4.89e-01 98.1% 61.7%
3q87B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 60.0 4.24e-01 100.0% 51.8%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.68 58.0 4.05e-01 100.0% 29.8%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 58.0 4.78e-01 100.0% 55.9%
4ozjA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 58.0 4.75e-01 100.0% 94.2%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 59.0 4.49e-01 100.0% 46.9%
3fxzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 58.0 4.79e-01 98.1% 60.2%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 59.0 4.83e-01 100.0% 57.4%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.67 57.0 4.93e-01 98.1% 65.9%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 57.0 4.62e-01 100.0% 50.9%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 58.0 4.56e-01 100.0% 48.3%
3mtiB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 58.0 4.06e-01 100.0% 50.6%
2n8lA00 3.30.310.210 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.66 57.0 3.95e-01 100.0% 28.8%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.66 54.0 4.70e-01 100.0% 58.6%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 56.0 4.26e-01 100.0% 44.6%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.66 55.0 5.09e-01 100.0% 74.3%
2jzxA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.66 58.0 5.14e-01 100.0% 69.6%
3jr1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 56.0 4.63e-01 98.1% 59.6%
1we8A01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.65 57.0 4.97e-01 100.0% 66.7%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.65 55.0 4.12e-01 100.0% 36.6%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.65 56.0 4.45e-01 100.0% 55.1%
5wt3A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 56.0 3.90e-01 98.1% 42.5%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.65 55.0 3.74e-01 100.0% 36.9%
3lnlB02 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 53.0 4.63e-01 100.0% 59.1%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.65 53.0 4.60e-01 100.0% 64.2%
6ztgA01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.64 51.0 4.65e-01 98.1% 64.0%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 50.0 4.41e-01 100.0% 55.6%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.64 53.0 4.10e-01 100.0% 43.8%
3luyA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 53.0 4.66e-01 100.0% 60.7%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.64 50.0 4.53e-01 98.1% 62.2%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.63 53.0 4.74e-01 98.1% 64.6%
3ix3A00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.63 54.0 3.92e-01 100.0% 69.3%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.63 54.0 4.23e-01 100.0% 55.4%
1t0tV02 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.63 55.0 4.38e-01 100.0% 59.5%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 48.0 4.27e-01 100.0% 58.0%
1uw4A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 51.0 4.43e-01 100.0% 58.2%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 52.0 4.45e-01 100.0% 94.7%
3s1tA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 49.0 4.49e-01 100.0% 65.0%
2py6A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 50.0 3.56e-01 96.3% 92.2%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.61 51.0 4.34e-01 98.1% 57.9%
4ponA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 53.0 3.76e-01 100.0% 43.6%
4gt8A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.61 51.0 3.97e-01 100.0% 45.1%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.61 48.0 3.58e-01 100.0% 31.5%
2e0zA01 3.30.2400.20 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › 0.60 47.0 3.99e-01 94.4% 71.0%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 4.41e-01 100.0% 60.0%
7kpsB01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 51.0 3.61e-01 100.0% 30.2%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 4.23e-01 100.0% 59.4%
1jw3A00 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.60 51.0 3.82e-01 98.1% 40.7%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 51.0 4.12e-01 100.0% 55.0%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.59 47.0 3.71e-01 100.0% 38.7%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.59 50.0 3.72e-01 100.0% 35.7%
2dgxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 49.0 4.36e-01 96.3% 67.5%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 4.38e-01 100.0% 66.7%
3mjgX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 4.17e-01 100.0% 53.5%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 49.0 4.19e-01 100.0% 57.8%
3bbaA00 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.58 48.0 3.25e-01 100.0% 40.7%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 4.37e-01 100.0% 65.9%
2petA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 3.97e-01 100.0% 58.6%
4kt5C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 50.0 4.30e-01 100.0% 68.2%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 48.0 4.27e-01 100.0% 69.4%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 50.0 4.22e-01 100.0% 59.8%
1wjwA01 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.57 46.0 4.14e-01 100.0% 75.3%
4d53A00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.57 47.0 3.68e-01 100.0% 52.6%
3tu3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 47.0 3.79e-01 100.0% 48.7%
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 37.0 2.96e-01 75.9% 28.5%
4c2mA09 3.30.70.2850 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 46.0 3.38e-01 100.0% 79.9%
4kvxA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 45.0 3.45e-01 100.0% 54.6%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4967300 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.85 75.0 6.37e-01 100.0% 61.2%
4951741 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.84 74.0 6.19e-01 100.0% 57.8%
5050897 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.84 75.0 6.31e-01 100.0% 61.2%
4947614 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.84 74.0 6.18e-01 100.0% 57.8%
4664239 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.83 77.0 6.36e-01 100.0% 87.8%
4116209 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.81 75.0 6.19e-01 100.0% 87.8%
4984314 304.43.1.6 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › FLAD1_M 0.80 71.0 5.88e-01 100.0% 57.8%
4944755 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.80 73.0 6.05e-01 100.0% 87.8%
4201490 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.79 71.0 5.97e-01 100.0% 87.8%
4935371 327.11.2.87 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › FLAD1_M 0.79 67.0 6.18e-01 100.0% 72.9%
4995222 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.79 68.0 6.03e-01 100.0% 68.0%
3492934 312.1.1.19 a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 0.78 67.0 4.85e-01 98.1% 37.4%
3329735 327.11.2.37 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st 0.76 66.0 6.05e-01 100.0% 74.3%
4633760 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.76 64.0 5.10e-01 100.0% 46.0%
4064719 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.75 63.0 5.11e-01 100.0% 49.5%
3211310 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.74 67.0 5.50e-01 100.0% 58.9%
3505207 2004.1.3.2 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR,EKR 0.74 66.0 4.15e-01 100.0% 21.9%
3686839 390.1.1.0 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.74 64.0 5.10e-01 98.1% 49.1%
4128067 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.74 62.0 5.00e-01 100.0% 47.3%
3695303 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.74 64.0 4.91e-01 100.0% 43.8%
3616172 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.74 64.0 5.65e-01 100.0% 66.3%
3476800 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.74 63.0 4.95e-01 100.0% 80.0%
3602910 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 64.0 5.46e-01 100.0% 61.1%
4934172 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 65.0 5.97e-01 100.0% 77.1%
3671929 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.73 64.0 5.68e-01 100.0% 67.5%
3814809 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.73 65.0 5.15e-01 100.0% 49.1%
3911770 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.73 64.0 5.56e-01 100.0% 63.5%
4096306 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 62.0 4.90e-01 100.0% 46.1%
3778029 327.11.2.18 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.72 61.0 5.42e-01 100.0% 65.0%
3236493 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.72 59.0 5.61e-01 100.0% 76.9%
4059572 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 63.0 5.02e-01 100.0% 50.9%
3877940 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.72 62.0 5.75e-01 98.1% 75.7%
3297269 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.72 64.0 5.04e-01 100.0% 49.1%
3378196 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.72 63.0 5.59e-01 100.0% 67.5%
4681936 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 60.0 4.76e-01 100.0% 45.2%
3211626 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.72 62.0 5.38e-01 100.0% 62.4%
3781955 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.72 63.0 5.18e-01 100.0% 54.0%
4086765 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.71 62.0 4.96e-01 100.0% 51.8%
3515783 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.71 63.0 5.25e-01 100.0% 56.8%
3223732 2003.1.5.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.71 62.0 4.26e-01 100.0% 43.7%
3369581 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.71 61.0 5.94e-01 98.1% 95.0%
3380460 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.71 63.0 5.05e-01 100.0% 51.4%
3171981 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.71 63.0 4.93e-01 100.0% 59.3%
3813425 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.71 62.0 4.83e-01 100.0% 45.0%
3866975 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.71 60.0 5.57e-01 100.0% 74.3%
5065934 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.71 60.0 5.22e-01 100.0% 62.4%
3374317 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.70 62.0 5.14e-01 100.0% 56.8%
3296288 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.70 61.0 4.88e-01 100.0% 49.1%
3772566 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.70 58.0 5.30e-01 100.0% 69.3%
3740866 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.70 60.0 5.25e-01 100.0% 63.5%
3397391 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.69 60.0 5.12e-01 100.0% 60.0%
3324139 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.69 62.0 5.12e-01 100.0% 56.8%
2067736 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 57.0 4.93e-01 100.0% 58.9%
3173837 327.11.2.35 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF29984 0.69 59.0 4.41e-01 100.0% 89.0%
4992144 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.69 57.0 4.68e-01 100.0% 48.6%
3407748 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.69 59.0 5.01e-01 100.0% 57.9%
3847949 327.11.2.4 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › MOEP19 0.69 60.0 4.84e-01 100.0% 50.5%
4240253 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.69 60.0 5.43e-01 100.0% 72.6%
4410723 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.69 59.0 4.82e-01 100.0% 60.0%
4389430 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.69 59.0 4.74e-01 100.0% 49.1%
3757456 327.11.2.4 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › MOEP19 0.69 59.0 5.57e-01 98.1% 80.0%
4973817 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.68 56.0 4.71e-01 100.0% 53.7%
3781976 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.68 59.0 5.16e-01 100.0% 63.5%
4960709 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.68 57.0 4.28e-01 100.0% 37.1%
4014111 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.68 59.0 4.95e-01 100.0% 56.8%
3690646 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.67 59.0 4.76e-01 100.0% 51.4%
3283943 304.8.1.80 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF6196 0.67 55.0 5.22e-01 100.0% 78.6%
4974604 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.67 58.0 4.39e-01 100.0% 41.6%
4571276 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.67 58.0 5.15e-01 100.0% 71.2%
3317423 387.1.5.15 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SLR1-BP 0.67 55.0 5.67e-01 96.3% 100.0%
4204243 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.67 56.0 3.32e-01 100.0% 12.2%
5066448 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.66 55.0 4.17e-01 100.0% 37.9%
4027654 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.66 57.0 5.15e-01 100.0% 72.0%
3638316 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.66 57.0 4.79e-01 100.0% 56.8%
3900852 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.66 56.0 4.73e-01 100.0% 56.8%
4947046 882.1.1.0 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 0.65 56.0 4.17e-01 100.0% 41.3%
3486254 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.65 55.0 4.94e-01 100.0% 67.5%
4954228 304.122.1.1 a+b two layers › Alpha-beta plaits › Nitrogen repressor-like proteins › Nitrogen repressor-like proteins › NRD1_2 0.65 52.0 4.22e-01 94.4% 47.4%
4990360 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.65 52.0 4.75e-01 98.1% 68.8%
3927592 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 51.0 4.10e-01 100.0% 40.8%
4930968 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.64 55.0 4.07e-01 100.0% 37.1%
3425342 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 54.0 4.94e-01 100.0% 72.0%
3663444 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.64 56.0 4.31e-01 100.0% 43.2%
4943808 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.64 53.0 4.01e-01 100.0% 38.0%
3518340 2004.1.3.2 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR,EKR 0.64 51.0 3.45e-01 98.1% 24.0%
5052672 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 51.0 4.79e-01 100.0% 74.3%
2330628 873.1.1.5 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.63 54.0 3.78e-01 100.0% 29.7%
4993028 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.63 55.0 4.09e-01 100.0% 38.6%
3436180 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 51.0 4.83e-01 100.0% 77.1%
4933206 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.62 50.0 4.53e-01 100.0% 64.7%
4934880 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.62 55.0 4.08e-01 100.0% 39.1%
5042110 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.62 53.0 4.01e-01 100.0% 38.6%
1873954 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 50.0 4.30e-01 100.0% 54.7%
4928119 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.61 49.0 4.53e-01 100.0% 68.0%
3499933 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.61 50.0 3.95e-01 100.0% 50.0%
4929473 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.60 47.0 4.26e-01 98.1% 62.4%
4169399 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.60 49.0 4.43e-01 98.1% 69.6%
4001719 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.58 46.0 4.06e-01 100.0% 57.9%
3550392 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 48.0 3.31e-01 100.0% 30.3%
3165282 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 46.0 2.91e-01 98.1% 32.7%