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KY389064.1__AQN32239.1__X__00008
Bact-VirKY389064.1__AQN32239.1__X__00008
Identity
- Accession:
- KY389064 ↗
- Kingdom:
- phage
Quality
67.7
mean pLDDT
Taxonomy
TaxID: 1955181
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-54
D2
high
residues 64-129
Domain cluster:
rep: MK448516.1__QBX10840.1__JavanS490_0006__00006__D2-76
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 46.5 | 6.30e-12 | 86.4% | 45.8% |
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.76 | 69.0 | 5.95e-01 | 100.0% | 79.2% |
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.69 | 61.0 | 5.22e-01 | 100.0% | 73.6% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 46.0 | 4.39e-01 | 71.2% | 62.3% |
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.66 | 56.0 | 4.95e-01 | 100.0% | 64.6% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 3.36e-01 | 71.2% | 30.1% |
| 2nnnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 44.0 | 3.55e-01 | 81.8% | 36.4% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 3.57e-01 | 72.7% | 41.7% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 3.56e-01 | 71.2% | 49.6% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 3.31e-01 | 83.3% | 33.3% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 40.0 | 3.58e-01 | 71.2% | 47.6% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 44.0 | 3.88e-01 | 81.8% | 53.3% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.45e-01 | 72.7% | 48.2% |
| 2kpmA01 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.57 | 47.0 | 4.54e-01 | 92.4% | 89.3% |
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.57 | 39.0 | 3.57e-01 | 74.2% | 61.2% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 39.0 | 3.44e-01 | 71.2% | 52.4% |
| 3akjA01 | 3.30.200.120 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.57 | 45.0 | 4.40e-01 | 100.0% | 78.4% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.56 | 35.0 | 3.26e-01 | 100.0% | 50.0% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 4.32e-01 | 95.5% | 94.7% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 3.60e-01 | 81.8% | 54.7% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 37.0 | 3.49e-01 | 71.2% | 64.0% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 44.0 | 2.92e-01 | 90.9% | 68.9% |
| 4oc8A01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.54 | 45.0 | 3.20e-01 | 93.9% | 50.7% |
| 2hnkA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 43.0 | 3.06e-01 | 93.9% | 78.2% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 44.0 | 3.20e-01 | 93.9% | 73.7% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 44.0 | 4.06e-01 | 100.0% | 87.0% |
| 2gpyB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 40.0 | 2.99e-01 | 87.9% | 85.9% |
| 3ntvA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 40.0 | 2.97e-01 | 90.9% | 90.5% |
| 2v4jB03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 33.0 | 3.40e-01 | 72.7% | 67.7% |
| 4ponA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 41.0 | 3.16e-01 | 93.9% | 91.3% |
| 3d89A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.51 | 42.0 | 3.31e-01 | 100.0% | 44.1% |
| 6lgqC01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.50 | 40.0 | 3.38e-01 | 95.5% | 95.4% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.50 | 37.0 | 2.51e-01 | 81.8% | 47.7% |
| 4ifdI01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 37.0 | 3.37e-01 | 84.8% | 59.3% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.94 | 80.0 | 6.76e-01 | 93.9% | 59.0% |
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.92 | 87.0 | 7.13e-01 | 100.0% | 60.9% |
| 3968916 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.88 | 81.0 | 6.83e-01 | 100.0% | 62.9% |
| 3944712 | 101.1.9.40 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N | 0.81 | 71.0 | 6.03e-01 | 95.5% | 61.0% |
| 3888996 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.73 | 64.0 | 5.69e-01 | 100.0% | 82.1% |
| 3525074 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.72 | 64.0 | 5.78e-01 | 100.0% | 86.7% |
| 4998593 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.71 | 62.0 | 5.19e-01 | 100.0% | 61.7% |
| 4003595 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.70 | 61.0 | 4.96e-01 | 100.0% | 60.5% |
| 3893451 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.69 | 62.0 | 5.31e-01 | 100.0% | 74.3% |
| 3861402 | 148.1.1.86 ↗ | alpha arrays › Histone-like › Histone-related › Histone › DUF5525 | 0.68 | 57.0 | 4.34e-01 | 95.5% | 83.6% |
| 3480621 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.68 | 60.0 | 5.35e-01 | 100.0% | 82.1% |
| 3932937 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.68 | 60.0 | 5.33e-01 | 100.0% | 82.1% |
| 3230106 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.68 | 60.0 | 5.26e-01 | 100.0% | 82.0% |
| 4959073 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.66 | 45.0 | 3.78e-01 | 72.7% | 40.8% |
| 4948012 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 45.0 | 3.82e-01 | 72.7% | 42.6% |
| 3197602 | 101.1.9.6 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N | 0.66 | 55.0 | 4.51e-01 | 100.0% | 49.2% |
| 3214527 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 57.0 | 4.63e-01 | 100.0% | 68.8% |
| 4928190 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.64 | 47.0 | 4.37e-01 | 81.8% | 61.9% |
| 5010592 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.64 | 46.0 | 3.83e-01 | 81.8% | 42.5% |
| 4950221 | 101.1.2.143 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_34 | 0.63 | 45.0 | 3.93e-01 | 78.8% | 47.2% |
| 5062261 | 101.1.2.892 ↗ | alpha arrays › HTH › HTH › winged helix domain › ArsR | 0.63 | 43.0 | 3.78e-01 | 72.7% | 47.0% |
| 4949226 | 101.1.2.892 ↗ | alpha arrays › HTH › HTH › winged helix domain › ArsR | 0.63 | 43.0 | 3.33e-01 | 72.7% | 31.2% |
| 5008107 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.62 | 43.0 | 3.73e-01 | 72.7% | 46.7% |
| 3488752 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.61 | 49.0 | 3.30e-01 | 90.9% | 81.5% |
| 2409292 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 42.0 | 3.70e-01 | 72.7% | 52.9% |
| 4983426 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 42.0 | 4.00e-01 | 81.8% | 60.0% |
| 4964272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 41.0 | 3.59e-01 | 71.2% | 45.7% |
| 4988080 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 41.0 | 4.08e-01 | 72.7% | 72.9% |
| 4960288 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.60 | 40.0 | 3.08e-01 | 71.2% | 33.1% |
| 4310506 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.59 | 44.0 | 3.10e-01 | 81.8% | 30.2% |
| 4940345 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.57 | 42.0 | 3.44e-01 | 81.8% | 43.7% |
| 5044327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 42.0 | 3.77e-01 | 81.8% | 55.0% |
| 3792911 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.57 | 41.0 | 3.57e-01 | 80.3% | 55.7% |
| 185814 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.57 | 39.0 | 3.71e-01 | 74.2% | 70.6% |
| 3619623 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.57 | 38.0 | 3.87e-01 | 100.0% | 70.8% |
| 5031473 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 42.0 | 3.66e-01 | 81.8% | 54.3% |
| 3516107 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.56 | 42.0 | 3.62e-01 | 84.8% | 58.3% |
| 4955849 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.55 | 43.0 | 3.13e-01 | 89.4% | 90.7% |
| 4122073 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.53 | 34.0 | 3.66e-01 | 72.7% | 80.0% |
| 3843442 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.53 | 43.0 | 3.61e-01 | 95.5% | 53.6% |
| 3542800 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.53 | 43.0 | 2.97e-01 | 95.5% | 26.3% |
| 3492533 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.52 | 41.0 | 3.22e-01 | 93.9% | 90.9% |
| 3942940 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.52 | 40.0 | 3.56e-01 | 100.0% | 56.0% |
| 3923009 | 3241.1.1.1 ↗ | alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › GPP34 | 0.52 | 38.0 | 2.68e-01 | 81.8% | 53.8% |
| 5050784 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 39.0 | 3.66e-01 | 84.8% | 65.6% |
| 3887336 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.52 | 42.0 | 3.03e-01 | 95.5% | 30.2% |
| 3567461 | 260.1.1.1 ↗ | a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › Plectin | 0.52 | 40.0 | 2.69e-01 | 89.4% | 47.1% |
| 4942688 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.51 | 37.0 | 3.61e-01 | 92.4% | 67.5% |
| 4929638 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.51 | 37.0 | 3.71e-01 | 90.9% | 77.1% |
| 4932760 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.51 | 37.0 | 3.66e-01 | 90.9% | 73.3% |
| 3739675 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.51 | 38.0 | 3.32e-01 | 84.8% | 57.3% |
| None | — | 0.50 | 42.0 | 3.37e-01 | 100.0% | 47.4% | |
| 4106050 | 316.1.1.6 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Mab-21 | 0.50 | 40.0 | 2.86e-01 | 95.5% | 69.0% |