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KY417925.1__APU92934.1__POI1126_06__00006
Bact-VirKY417925.1__APU92934.1__POI1126_06__00006
Identity
- Accession:
- KY417925 ↗
- Kingdom:
- phage
Quality
88.3
mean pLDDT
Taxonomy
TaxID: 1932118
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-64
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wchA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.68 | 50.0 | 3.18e-01 | 78.1% | 40.9% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.67 | 52.0 | 4.08e-01 | 82.8% | 76.7% |
| 2xr1A03 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.66 | 45.0 | 2.94e-01 | 70.3% | 57.0% |
| 7xgtA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.65 | 44.0 | 2.92e-01 | 70.3% | 62.8% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.62 | 39.0 | 3.49e-01 | 73.4% | 45.1% |
| 1y44A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 42.0 | 2.82e-01 | 71.9% | 64.6% |
| 4yshA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.61 | 41.0 | 3.14e-01 | 70.3% | 66.4% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 3.47e-01 | 100.0% | 62.1% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.07e-01 | 73.4% | 63.9% |
| 3fcdB00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 39.0 | 3.26e-01 | 81.2% | 76.5% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.52 | 40.0 | 3.21e-01 | 87.5% | 44.7% |
| 3dlbA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 36.0 | 2.75e-01 | 76.6% | 90.9% |
| 4k2xB02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 37.0 | 3.47e-01 | 81.2% | 64.6% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 38.0 | 2.60e-01 | 82.8% | 85.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4121883 | 4313.1.1.1 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like › CsrA | 0.91 | 62.0 | 5.81e-01 | 70.3% | 61.3% |
| 4329130 | 4313.1.1.1 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like › CsrA | 0.90 | 61.0 | 6.90e-01 | 70.3% | 92.0% |
| 3966297 | 4313.1.1.0 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like | 0.90 | 61.0 | 6.32e-01 | 70.3% | 76.7% |
| 4615993 | 4313.1.1.1 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like › CsrA | 0.86 | 62.0 | 5.99e-01 | 75.0% | 70.0% |
| 5075272 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.67 | 45.0 | 2.98e-01 | 70.3% | 59.6% |
| 3683253 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.65 | 44.0 | 2.83e-01 | 70.3% | 68.2% |
| 5019488 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.64 | 50.0 | 3.78e-01 | 84.4% | 64.7% |
| 3238303 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 45.0 | 3.81e-01 | 78.1% | 66.4% |
| 4867166 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 36.0 | 4.37e-01 | 70.3% | 97.4% |
| 4595973 | 1.1.12.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins | 0.58 | 51.0 | 4.20e-01 | 100.0% | 81.7% |
| 4958477 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.25e-01 | 93.8% | 95.6% |
| 3504860 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.56 | 41.0 | 3.98e-01 | 76.6% | 88.6% |
| 3283213 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 41.0 | 3.51e-01 | 84.4% | 57.1% |
| 4938531 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.51 | 40.0 | 3.14e-01 | 92.2% | 95.0% |