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KY417925.1__APU92978.1__POI1126_51__00050
Bact-VirKY417925.1__APU92978.1__POI1126_51__00050
Identity
- Accession:
- KY417925 ↗
- Kingdom:
- phage
Quality
64.3
mean pLDDT
Taxonomy
TaxID: 1932118
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 157-223
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wbfX00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 47.0 | 3.17e-01 | 83.6% | 91.3% |
| 2vbuA01 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.61 | 51.0 | 4.27e-01 | 100.0% | 96.2% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 45.0 | 3.66e-01 | 89.6% | 75.9% |
| 6j7cA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 45.0 | 3.56e-01 | 95.5% | 60.0% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 43.0 | 3.36e-01 | 89.6% | 88.4% |
| 1h7zA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.56 | 38.0 | 2.81e-01 | 71.6% | 27.2% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 38.0 | 3.40e-01 | 71.6% | 79.8% |
| 6secA03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 44.0 | 2.92e-01 | 89.6% | 75.4% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.55 | 41.0 | 3.83e-01 | 82.1% | 62.5% |
| 1nqzA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 37.0 | 2.81e-01 | 74.6% | 28.1% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 41.0 | 3.16e-01 | 80.6% | 36.9% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.51e-01 | 77.6% | 63.0% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 40.0 | 2.95e-01 | 83.6% | 73.4% |
| 3ijcA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 40.0 | 2.62e-01 | 88.1% | 29.4% |
| 5wfiA01 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 36.0 | 3.05e-01 | 100.0% | 40.5% |
| 1faoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.52e-01 | 85.1% | 79.0% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 42.0 | 3.50e-01 | 94.0% | 67.7% |
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.44e-01 | 89.6% | 80.8% |
| 1w0pA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 40.0 | 2.57e-01 | 89.6% | 27.1% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 44.0 | 4.37e-01 | 98.5% | 93.1% |
| 3gzrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 38.0 | 3.13e-01 | 85.1% | 48.9% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 35.0 | 2.86e-01 | 97.0% | 36.5% |
| 3iiiA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 38.0 | 2.63e-01 | 88.1% | 45.1% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 36.0 | 3.54e-01 | 77.6% | 83.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3854864 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 49.0 | 4.22e-01 | 97.0% | 47.0% |
| 3878170 | 5.1.4.549 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF28327 | 0.65 | 51.0 | 3.34e-01 | 88.1% | 48.0% |
| 3974846 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.62 | 48.0 | 4.09e-01 | 97.0% | 51.8% |
| 3967584 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.60 | 43.0 | 4.15e-01 | 77.6% | 65.0% |
| 4020096 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 43.0 | 3.43e-01 | 77.6% | 52.1% |
| 3668377 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 45.0 | 2.74e-01 | 83.6% | 37.4% |
| 3486509 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 40.0 | 3.44e-01 | 71.6% | 78.3% |
| 3702882 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 44.0 | 2.82e-01 | 85.1% | 29.9% |
| 3392282 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.58 | 43.0 | 2.80e-01 | 82.1% | 32.4% |
| 3716056 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 43.0 | 3.04e-01 | 88.1% | 44.2% |
| 3255827 | 220.1.1.29 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 | 0.57 | 45.0 | 3.71e-01 | 91.0% | 83.0% |
| 4012035 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.57 | 44.0 | 3.06e-01 | 89.6% | 94.1% |
| 3707121 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 3.73e-01 | 74.6% | 74.7% |
| 4130525 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 43.0 | 2.67e-01 | 88.1% | 40.7% |
| 3227845 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 44.0 | 2.77e-01 | 89.6% | 31.0% |
| 4027489 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 45.0 | 2.82e-01 | 97.0% | 92.6% |
| 3655121 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 43.0 | 2.61e-01 | 89.6% | 44.7% |
| 3332026 | 331.3.1.28 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 | 0.52 | 39.0 | 2.95e-01 | 83.6% | 35.8% |
| 4026002 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 40.0 | 2.55e-01 | 86.6% | 30.7% |
| 3432796 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.52 | 38.0 | 3.65e-01 | 80.6% | 78.8% |
| 3888390 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 39.0 | 2.53e-01 | 86.6% | 35.5% |
| 3692168 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 40.0 | 2.46e-01 | 91.0% | 32.5% |
| 3508437 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 39.0 | 2.57e-01 | 88.1% | 87.0% |
| 3939142 | 206.1.1.78 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kinase-like | 0.51 | 41.0 | 2.57e-01 | 89.6% | 29.2% |
| 3461166 | 5.1.4.414 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lgl_C | 0.51 | 37.0 | 2.40e-01 | 83.6% | 47.4% |
| 3190995 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.51 | 38.0 | 2.87e-01 | 82.1% | 67.4% |
| 3578470 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.51 | 37.0 | 2.42e-01 | 80.6% | 31.3% |
| 3734570 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.50 | 39.0 | 2.50e-01 | 88.1% | 85.9% |
| 3919540 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.50 | 42.0 | 2.76e-01 | 97.0% | 96.4% |
| None | — | 0.50 | 41.0 | 2.71e-01 | 97.0% | 82.6% | |
| 3341382 | 5.1.4.411 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF2415 | 0.50 | 38.0 | 2.47e-01 | 89.6% | 58.5% |
| 3992164 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 39.0 | 2.51e-01 | 89.6% | 88.3% |
D2
medium
residues 54-131