Back to structures

KY421186.2__APZ82910.1__X__00016

Bact-Vir

KY421186.2__APZ82910.1__X__00016

Identity

Accession:
KY421186 ↗
Kingdom:
phage

Quality

92.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-81
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ob9A00 3.30.2220.20 Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like 0.72 63.0 5.67e-01 100.0% 87.9%
3fgxA00 3.30.2220.10 Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 0.69 61.0 5.67e-01 100.0% 79.2%
3gr0D01 3.30.70.1780 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 26.0 3.50e-01 88.2% 78.0%
2abqA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 43.0 2.99e-01 92.1% 41.0%
2o71A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.52 43.0 4.03e-01 89.5% 87.9%
4gkfA00 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.51 42.0 3.51e-01 96.1% 97.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
333304 6050.1.1.1 a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_1 0.72 63.0 5.71e-01 100.0% 79.8%
185252 3547.1.1.1 a+b two layers › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › DUF6848 0.69 61.0 5.67e-01 100.0% 79.2%
1824155 103.1.1.28 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_8 0.69 35.0 3.73e-01 78.9% 53.6%
3560252 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.55 41.0 3.37e-01 81.6% 92.0%