←Back to structures
KY448244.1__AQT28540.1__YOLOSWAG_56__00056
Bact-VirKY448244.1__AQT28540.1__YOLOSWAG_56__00056
Identity
- Accession:
- KY448244 ↗
- Kingdom:
- phage
Quality
59.4
mean pLDDT
Taxonomy
TaxID: 1958956
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-69
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jtnB00 | 3.30.70.1950 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 59.0 | 5.32e-01 | 100.0% | 90.0% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.65 | 57.0 | 4.57e-01 | 98.5% | 67.2% |
| 1g71A01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.65 | 58.0 | 3.95e-01 | 100.0% | 47.5% |
| 2iruA02 | 3.30.70.3300 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 56.0 | 4.41e-01 | 98.5% | 89.9% |
| 1i8nA00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.63 | 53.0 | 4.84e-01 | 100.0% | 69.7% |
| 4iuhA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.63 | 51.0 | 4.06e-01 | 92.4% | 85.3% |
| 3bh1A03 | 3.40.140.40 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain | 0.62 | 49.0 | 3.91e-01 | 90.9% | 82.9% |
| 4bwiB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.62 | 48.0 | 3.50e-01 | 84.8% | 60.5% |
| 4bwiB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 46.0 | 3.35e-01 | 87.9% | 69.3% |
| 1gmnA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.57 | 49.0 | 4.51e-01 | 100.0% | 73.9% |
| 2vjwA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 45.0 | 3.60e-01 | 87.9% | 75.4% |
| 1xreA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.56 | 45.0 | 3.91e-01 | 95.5% | 54.5% |
| 3ekiA01 | 3.40.190.180 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Cypl, domain I | 0.55 | 45.0 | 3.50e-01 | 100.0% | 45.5% |
| 3w2zA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 42.0 | 3.23e-01 | 87.9% | 69.7% |
| 4xmqA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 45.0 | 3.64e-01 | 92.4% | 88.0% |
| 7lscA01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 42.0 | 3.27e-01 | 84.8% | 74.5% |
| 5flmA02 | 3.30.1360.140 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 37.0 | 3.08e-01 | 75.8% | 72.8% |
| 6izcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 39.0 | 2.69e-01 | 80.3% | 88.2% |
| 1d0nA06 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 40.0 | 3.29e-01 | 86.4% | 51.2% |
| 1ysqA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 42.0 | 3.12e-01 | 92.4% | 98.3% |
| 2yxlA03 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.51 | 37.0 | 3.94e-01 | 78.8% | 96.6% |
| 3daoA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.51 | 39.0 | 3.44e-01 | 93.9% | 54.1% |
| 2xfaA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 42.0 | 3.30e-01 | 93.9% | 46.9% |
| 3l7yA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.50 | 39.0 | 3.42e-01 | 93.9% | 54.1% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5061487 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.65 | 46.0 | 3.66e-01 | 75.8% | 50.7% |
| 4461334 | 304.150.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA | 0.65 | 58.0 | 5.24e-01 | 100.0% | 92.2% |
| 3437400 | 390.1.1.8 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_4 | 0.65 | 52.0 | 4.99e-01 | 100.0% | 77.3% |
| 3290970 | 2492.1.1.45 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › PF26947 | 0.64 | 51.0 | 4.36e-01 | 92.4% | 60.0% |
| 3199004 | 2002.1.1.123 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Wyosine_form | 0.63 | 54.0 | 3.35e-01 | 95.5% | 28.6% |
| 3182274 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 45.0 | 3.15e-01 | 78.8% | 37.3% |
| 3735034 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.62 | 49.0 | 4.54e-01 | 100.0% | 67.1% |
| 3596732 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.61 | 46.0 | 4.50e-01 | 100.0% | 73.3% |
| 3340586 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.61 | 51.0 | 4.71e-01 | 100.0% | 72.9% |
| 4954188 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.60 | 49.0 | 3.86e-01 | 92.4% | 43.6% |
| 3214943 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.60 | 50.0 | 4.74e-01 | 100.0% | 78.8% |
| 5007991 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.60 | 46.0 | 3.71e-01 | 83.3% | 70.0% |
| 3845679 | 355.1.1.6 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › MGC-24 | 0.60 | 41.0 | 4.30e-01 | 100.0% | 85.5% |
| 3233120 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.60 | 48.0 | 4.58e-01 | 100.0% | 75.0% |
| 3691084 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.60 | 47.0 | 3.38e-01 | 87.9% | 65.2% |
| 3822150 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.60 | 49.0 | 4.43e-01 | 100.0% | 66.7% |
| 3195250 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 44.0 | 3.14e-01 | 80.3% | 40.5% |
| 3599507 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.59 | 45.0 | 4.44e-01 | 98.5% | 78.6% |
| 3226096 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.59 | 52.0 | 4.79e-01 | 100.0% | 77.6% |
| 3888455 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.59 | 50.0 | 4.58e-01 | 100.0% | 71.1% |
| 3308189 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.58 | 46.0 | 4.33e-01 | 100.0% | 69.4% |
| 3579295 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.58 | 49.0 | 4.49e-01 | 100.0% | 71.1% |
| 3239582 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.57 | 50.0 | 4.34e-01 | 100.0% | 81.0% |
| 3230527 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.57 | 49.0 | 4.62e-01 | 100.0% | 80.0% |
| 3214931 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.57 | 48.0 | 4.51e-01 | 100.0% | 77.6% |
| 3515912 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.57 | 49.0 | 4.48e-01 | 100.0% | 78.9% |
| 3240213 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.57 | 46.0 | 4.55e-01 | 100.0% | 85.7% |
| 4478999 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.57 | 36.0 | 2.72e-01 | 74.2% | 24.9% |
| 3214941 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 46.0 | 4.44e-01 | 100.0% | 80.0% |
| 3241299 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 48.0 | 4.30e-01 | 100.0% | 72.7% |
| 3925874 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 48.0 | 4.45e-01 | 100.0% | 76.5% |
| 3735504 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.56 | 48.0 | 4.36e-01 | 100.0% | 71.6% |
| 3502670 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 47.0 | 4.09e-01 | 100.0% | 60.0% |
| 3406433 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.56 | 46.0 | 4.16e-01 | 97.0% | 91.0% |
| 3535542 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 46.0 | 4.28e-01 | 100.0% | 72.9% |
| 5045649 | 223.1.1.51 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 | 0.56 | 45.0 | 3.20e-01 | 92.4% | 81.3% |
| 3217661 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 47.0 | 4.37e-01 | 100.0% | 75.3% |
| 3370149 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 42.0 | 3.90e-01 | 100.0% | 62.2% |
| 3793353 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 47.0 | 4.38e-01 | 100.0% | 74.4% |
| 3936711 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 46.0 | 4.53e-01 | 100.0% | 85.3% |
| 3218868 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 47.0 | 4.29e-01 | 100.0% | 72.6% |
| 3620035 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 48.0 | 4.45e-01 | 100.0% | 80.0% |
| 3669499 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.55 | 42.0 | 4.10e-01 | 100.0% | 74.7% |
| 3624385 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.55 | 47.0 | 4.21e-01 | 100.0% | 69.0% |
| 3579910 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.55 | 43.0 | 4.51e-01 | 92.4% | 100.0% |
| 3625214 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.55 | 45.0 | 4.07e-01 | 100.0% | 65.3% |
| 3924676 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.55 | 47.0 | 4.21e-01 | 100.0% | 68.4% |
| 4380080 | 880.1.1.4 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › PF30495 | 0.54 | 47.0 | 2.85e-01 | 95.5% | 57.6% |
| 5042462 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.54 | 38.0 | 2.87e-01 | 83.3% | 29.1% |
| 4645846 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.54 | 36.0 | 2.76e-01 | 77.3% | 27.1% |
| 3803359 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.53 | 39.0 | 3.67e-01 | 78.8% | 76.2% |
| 4646072 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.53 | 35.0 | 2.70e-01 | 75.8% | 26.5% |
| 4527101 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.53 | 35.0 | 2.74e-01 | 77.3% | 28.7% |
| 3800729 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.53 | 46.0 | 4.18e-01 | 100.0% | 75.6% |
| 3992652 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.52 | 46.0 | 4.27e-01 | 100.0% | 77.6% |
| 3406507 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.52 | 45.0 | 4.02e-01 | 100.0% | 81.0% |
| 4005257 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.52 | 41.0 | 2.91e-01 | 92.4% | 81.9% |
| 3506588 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.51 | 44.0 | 3.90e-01 | 100.0% | 64.6% |
| 4679654 | 223.6.1.1 ↗ | a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like | 0.51 | 40.0 | 3.12e-01 | 89.4% | 70.7% |
D2
medium
residues 73-153