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KY448244.1__AQT28581.1__YOLOSWAG_99__00099

Bact-Vir

KY448244.1__AQT28581.1__YOLOSWAG_99__00099

Identity

Accession:
KY448244 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yoloswagvirus› Erwinia_phage_vB_EamM_Yoloswag

TaxID: 1958956

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-47
PDB
Domain cluster: representative
CATH (84)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.89 74.0 6.80e-01 97.6% 72.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 73.0 6.66e-01 100.0% 71.4%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 76.0 7.07e-01 100.0% 78.8%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 71.0 6.16e-01 92.9% 60.3%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 65.0 5.94e-01 88.1% 62.5%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 73.0 6.76e-01 97.6% 74.1%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 67.0 5.36e-01 90.5% 45.0%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.86 75.0 5.75e-01 100.0% 44.7%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 71.0 5.58e-01 95.2% 45.9%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 65.0 5.47e-01 90.5% 50.0%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 67.0 5.79e-01 90.5% 56.9%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 69.0 6.76e-01 100.0% 84.4%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 65.0 5.85e-01 90.5% 62.1%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 66.0 5.88e-01 90.5% 60.7%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 66.0 5.75e-01 90.5% 57.8%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 62.0 5.57e-01 85.7% 58.6%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 65.0 5.29e-01 90.5% 46.3%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 63.0 5.26e-01 90.5% 48.0%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 5.66e-01 92.9% 60.0%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 5.83e-01 90.5% 67.2%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 68.0 6.35e-01 92.9% 75.0%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.82 68.0 4.86e-01 100.0% 31.7%
7u37A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 58.0 5.05e-01 76.2% 57.1%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 68.0 6.59e-01 100.0% 83.3%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 63.0 5.51e-01 90.5% 57.1%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 6.28e-01 100.0% 71.2%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.80 64.0 4.95e-01 92.9% 40.4%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 5.88e-01 85.7% 72.0%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 63.0 6.26e-01 95.2% 88.6%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.91e-01 92.9% 72.2%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 6.01e-01 97.6% 72.7%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 60.0 6.06e-01 92.9% 92.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.66e-01 100.0% 62.7%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.63e-01 100.0% 63.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.77 65.0 4.02e-01 100.0% 17.2%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 5.52e-01 97.6% 63.4%
3mkzN00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.76 64.0 4.71e-01 95.2% 38.2%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.35e-01 90.5% 59.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.90e-01 92.9% 78.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 4.31e-01 90.5% 32.6%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.29e-01 90.5% 60.3%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.06e-01 90.5% 52.8%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 5.94e-01 85.7% 92.3%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 63.0 5.67e-01 100.0% 68.9%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 62.0 4.74e-01 97.6% 85.4%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 64.0 5.79e-01 100.0% 75.0%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.04e-01 90.5% 58.3%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.39e-01 100.0% 61.4%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.39e-01 92.9% 63.9%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.47e-01 100.0% 66.2%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.53e-01 100.0% 66.1%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 4.51e-01 100.0% 38.6%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 4.49e-01 100.0% 39.2%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 4.57e-01 92.9% 39.0%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.30e-01 100.0% 58.3%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 4.30e-01 100.0% 35.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 4.47e-01 92.9% 37.5%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 54.0 4.45e-01 81.0% 47.4%
5k7fA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 55.0 5.59e-01 83.3% 100.0%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.49e-01 100.0% 67.2%
2ijlB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 4.50e-01 97.6% 42.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 62.0 4.83e-01 100.0% 46.8%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 54.0 4.27e-01 81.0% 41.5%
2j5oA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 4.92e-01 95.2% 58.5%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 4.98e-01 95.2% 60.3%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.71 59.0 4.19e-01 100.0% 59.9%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 58.0 5.64e-01 97.6% 85.1%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.33e-01 97.6% 66.1%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.90e-01 95.2% 59.2%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 53.0 4.58e-01 83.3% 53.0%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.69 56.0 5.46e-01 92.9% 84.8%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 4.04e-01 100.0% 32.1%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 51.0 4.35e-01 81.0% 51.5%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 59.0 4.89e-01 100.0% 59.2%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 50.0 3.90e-01 81.0% 42.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 58.0 5.07e-01 100.0% 64.6%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.21e-01 92.9% 43.8%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.77e-01 100.0% 60.9%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 55.0 3.74e-01 100.0% 31.2%
2g7gA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 55.0 3.62e-01 100.0% 35.5%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 4.72e-01 100.0% 68.9%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 55.0 4.81e-01 97.6% 64.1%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.62 42.0 4.11e-01 76.2% 61.5%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 46.0 4.46e-01 97.6% 90.9%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4385054 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.94 82.0 8.40e-01 100.0% 100.0%
5063318 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.93 81.0 7.34e-01 100.0% 72.7%
3787646 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 79.0 8.16e-01 92.9% 97.5%
3767621 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.91 81.0 6.34e-01 95.2% 50.0%
4637005 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.91 80.0 5.47e-01 95.2% 30.8%
4115147 101.1.1.96 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Neugrin 0.90 80.0 6.03e-01 95.2% 44.4%
3736326 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 79.0 6.70e-01 95.2% 61.5%
3509240 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.90 72.0 6.20e-01 95.2% 56.9%
4372277 101.1.1.96 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Neugrin 0.90 79.0 5.70e-01 95.2% 38.1%
3741366 101.1.1.96 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Neugrin 0.89 78.0 6.64e-01 95.2% 61.5%
3279339 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.87 70.0 4.47e-01 90.5% 20.0%
2464007 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 70.0 5.97e-01 90.5% 56.1%
4944887 101.1.1.546 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.87 73.0 5.23e-01 100.0% 33.3%
3953011 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 75.0 6.82e-01 100.0% 72.7%
3968008 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 70.0 6.64e-01 92.9% 76.0%
4303963 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 68.0 5.62e-01 90.5% 49.3%
3973360 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 70.0 5.88e-01 92.9% 54.3%
5027753 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 73.0 7.18e-01 100.0% 91.1%
3781995 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 72.0 6.40e-01 95.2% 66.7%
4040211 101.1.2.89 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.85 69.0 6.12e-01 90.5% 63.3%
5072420 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 71.0 6.68e-01 92.9% 78.0%
5037302 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 67.0 5.96e-01 88.1% 61.7%
4978612 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 66.0 5.91e-01 88.1% 61.7%
3786618 101.1.1.201 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.84 76.0 5.28e-01 100.0% 47.6%
4610234 101.1.2.89 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.83 68.0 6.01e-01 90.5% 63.3%
3784774 101.1.1.35 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.83 68.0 6.09e-01 95.2% 65.0%
3923654 101.1.1.356 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 0.83 72.0 6.43e-01 100.0% 70.0%
4318089 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.83 67.0 5.98e-01 90.5% 63.3%
4449179 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 67.0 5.97e-01 90.5% 63.3%
5010215 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 67.0 5.97e-01 90.5% 63.3%
2554 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.83 72.0 5.56e-01 100.0% 46.1%
5056141 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 68.0 6.25e-01 92.9% 70.9%
3590753 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 70.0 6.66e-01 100.0% 82.0%
4010472 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 66.0 6.25e-01 90.5% 76.0%
5046600 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 64.0 4.94e-01 85.7% 40.0%
4962128 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 68.0 5.70e-01 92.9% 55.7%
5048567 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 67.0 5.82e-01 92.9% 60.0%
4020328 101.1.1.35 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.81 68.0 6.69e-01 97.6% 91.1%
5032601 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 70.0 6.48e-01 100.0% 76.4%
5066726 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 64.0 5.67e-01 88.1% 61.7%
5038325 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 65.0 6.21e-01 90.5% 77.6%
5060508 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 64.0 6.55e-01 88.1% 92.5%
5070906 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 68.0 6.09e-01 100.0% 68.3%
4943479 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 63.0 5.98e-01 88.1% 74.0%
3926525 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.80 66.0 6.70e-01 95.2% 100.0%
3955987 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 69.0 5.27e-01 97.6% 83.2%
5076741 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 67.0 6.39e-01 97.6% 80.0%
5009645 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 67.0 5.44e-01 97.6% 50.0%
4980944 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 63.0 5.17e-01 90.5% 47.5%
5030496 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 63.0 5.69e-01 90.5% 63.3%
5053647 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 65.0 5.98e-01 92.9% 70.9%
4978144 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 65.0 5.81e-01 92.9% 65.0%
5009656 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 64.0 5.55e-01 90.5% 58.5%
5032612 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 6.21e-01 100.0% 76.4%
4047135 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 61.0 5.79e-01 85.7% 72.0%
5078523 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 63.0 4.18e-01 90.5% 23.0%
4928849 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 66.0 5.86e-01 97.6% 66.7%
4977346 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 62.0 5.95e-01 90.5% 76.0%
4949793 101.1.2.652 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.78 63.0 4.43e-01 90.5% 30.0%
1392865 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.78 63.0 5.78e-01 92.9% 68.4%
4943799 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 60.0 5.77e-01 88.1% 74.0%
5039985 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 5.53e-01 92.9% 60.0%
5065632 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 64.0 4.91e-01 97.6% 45.0%
4979789 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.76 63.0 5.85e-01 97.6% 74.5%
3387962 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.76 60.0 5.60e-01 90.5% 70.4%
4060755 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 4.24e-01 90.5% 30.0%
4945046 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 60.0 4.51e-01 90.5% 36.2%
3942897 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 63.0 5.24e-01 100.0% 55.0%
5053927 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.75 61.0 4.21e-01 90.5% 30.0%
3928067 101.1.1.356 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 0.75 65.0 6.01e-01 100.0% 76.4%
3937075 101.1.1.62 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.75 65.0 6.01e-01 100.0% 76.4%
4989162 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.75 60.0 4.99e-01 90.5% 56.0%
5030083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 5.78e-01 95.2% 82.0%
4999429 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.74 58.0 3.69e-01 90.5% 17.2%
4935247 101.1.2.210 ↗ alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.74 62.0 4.83e-01 100.0% 44.0%
4980888 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 62.0 5.38e-01 100.0% 61.5%
1100748 101.1.2.36 ↗ alpha arrays › HTH › HTH › winged helix domain › z-alpha 0.74 61.0 5.35e-01 92.9% 61.9%
3738604 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 4.65e-01 100.0% 41.0%
4957433 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.73 58.0 5.14e-01 92.9% 60.0%
4989929 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 57.0 5.62e-01 97.6% 84.4%
4961693 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.72 60.0 4.97e-01 100.0% 52.5%
4958659 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 59.0 4.63e-01 92.9% 43.3%
4969888 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.71 58.0 5.23e-01 92.9% 65.0%
4971366 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 54.0 4.63e-01 90.5% 52.0%
3587350 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 60.0 5.70e-01 97.6% 84.0%
3282102 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.69 57.0 3.95e-01 97.6% 34.0%
3587618 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 58.0 4.71e-01 100.0% 49.4%
4165729 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.68 60.0 3.99e-01 100.0% 27.9%
4333531 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 59.0 5.62e-01 100.0% 86.0%
4966784 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 4.97e-01 95.2% 68.3%
3363636 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.67 57.0 4.63e-01 100.0% 54.1%
3374351 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.63 45.0 4.41e-01 85.7% 74.0%
D2 high residues 61-161
PDB
Domain cluster: rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 41.0 1.50e-10 46.5% 95.7%
D3 medium residues 165-231
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1iufA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 51.0 4.95e-01 80.6% 74.0%
6dnwA01 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.67 59.0 4.86e-01 100.0% 80.5%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 49.0 5.02e-01 80.6% 83.3%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.71e-01 82.1% 77.3%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.65 44.0 4.52e-01 71.6% 74.6%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 47.0 4.76e-01 95.5% 79.4%
2b4lA02 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.62 51.0 4.01e-01 95.5% 91.7%
1ignB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 49.0 4.52e-01 91.0% 92.4%
3qrxA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 42.0 4.21e-01 70.1% 73.5%
1guxB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.60 49.0 3.98e-01 94.0% 55.3%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 51.0 4.98e-01 100.0% 88.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.63e-01 97.0% 41.9%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 4.71e-01 100.0% 78.8%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.66e-01 98.5% 79.3%
4behA01 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 45.0 4.62e-01 85.1% 92.2%
3vokA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 48.0 3.66e-01 98.5% 64.2%
1pieA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.57 46.0 3.39e-01 95.5% 77.3%
4hhxA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.56 45.0 4.00e-01 92.5% 92.3%
2ly1A03 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.55 44.0 4.25e-01 98.5% 79.0%
4ociA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 37.0 3.81e-01 74.6% 72.7%
5jolA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 41.0 3.91e-01 83.6% 86.6%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 42.0 4.15e-01 92.5% 84.3%
3iqtA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.51 40.0 3.49e-01 91.0% 95.6%
2i62A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 40.0 2.79e-01 91.0% 46.3%
3e0fA02 1.10.150.650 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.51 36.0 3.58e-01 76.1% 81.1%
1m45A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.50 35.0 3.57e-01 80.6% 74.6%
1hnnA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 40.0 2.77e-01 92.5% 44.8%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3738343 101.1.1.79 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.72 55.0 5.79e-01 83.6% 96.7%
4014609 101.1.1.79 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.72 56.0 5.70e-01 85.1% 89.2%
3899987 101.1.1.12 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.71 57.0 5.32e-01 100.0% 70.6%
3228613 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 4.96e-01 91.0% 70.5%
4946654 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 5.51e-01 94.0% 93.3%
4979742 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 4.93e-01 95.5% 70.0%
4926838 101.43.1.0 ↗ alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.67 51.0 5.15e-01 94.0% 84.6%
3584520 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 4.38e-01 86.6% 70.9%
3234666 101.1.2.577 ↗ alpha arrays › HTH › HTH › winged helix domain › SPK 0.65 55.0 4.58e-01 95.5% 100.0%
4957643 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.65 54.0 3.67e-01 95.5% 43.0%
3215919 101.1.1.264 ↗ alpha arrays › HTH › HTH › Three-helical HTH › SPK 0.64 54.0 4.54e-01 98.5% 99.2%
4927588 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 51.0 5.01e-01 92.5% 92.0%
3233735 101.1.1.264 ↗ alpha arrays › HTH › HTH › Three-helical HTH › SPK 0.63 53.0 5.06e-01 98.5% 92.5%
1762928 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.61 41.0 4.15e-01 70.1% 95.7%
3815826 108.1.1.100 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7, EF-hand_8 0.61 42.0 3.62e-01 71.6% 95.5%
5027917 2484.1.1.101 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 0.61 50.0 3.46e-01 94.0% 97.5%
3404059 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.61 51.0 4.32e-01 95.5% 80.0%
4256263 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.60 41.0 3.96e-01 70.1% 84.0%
3362305 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.60 45.0 3.70e-01 80.6% 95.2%
3343116 108.1.1.1 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 0.60 41.0 3.90e-01 71.6% 86.3%
3239312 101.1.1.264 ↗ alpha arrays › HTH › HTH › Three-helical HTH › SPK 0.59 50.0 4.32e-01 97.0% 67.9%
3646870 108.1.1.27 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.59 40.0 4.01e-01 70.1% 94.3%
4029184 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.58 41.0 4.05e-01 71.6% 81.4%
3744236 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.58 40.0 3.82e-01 71.6% 71.2%
3302017 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.58 40.0 3.85e-01 70.1% 86.7%
3883984 108.1.1.167 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_10 0.58 41.0 4.09e-01 74.6% 71.4%
3221998 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 48.0 3.78e-01 94.0% 83.4%
3830825 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.58 39.0 3.33e-01 70.1% 45.9%
3551200 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.58 39.0 3.84e-01 71.6% 86.7%
3595462 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 39.0 3.86e-01 70.1% 90.0%
None — 0.58 46.0 2.84e-01 91.0% 52.2%
3360690 108.1.1.132 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7, EF-hand_8 0.57 45.0 3.81e-01 85.1% 74.5%
3516301 108.1.1.104 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_8 0.57 48.0 4.16e-01 94.0% 77.1%
3531025 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.57 46.0 4.05e-01 92.5% 79.0%
3485448 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 40.0 3.86e-01 74.6% 66.7%
3608310 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.56 44.0 4.17e-01 85.1% 85.0%
3996516 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.56 38.0 3.61e-01 71.6% 77.6%
3347783 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.56 38.0 3.56e-01 70.1% 75.9%
3217642 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.56 39.0 3.70e-01 73.1% 71.2%
3292878 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.56 37.0 3.66e-01 70.1% 86.7%
3312560 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.56 38.0 3.89e-01 70.1% 100.0%
3510130 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 37.0 3.55e-01 70.1% 71.2%
3509014 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.55 38.0 3.41e-01 71.6% 74.7%
3396880 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.55 43.0 4.07e-01 85.1% 85.0%
4153111 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.55 43.0 3.92e-01 85.1% 76.7%
3345058 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.55 41.0 3.89e-01 79.1% 76.2%
3929207 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.55 48.0 4.38e-01 98.5% 85.6%
3671957 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.55 39.0 3.52e-01 74.6% 55.6%
3703587 108.1.1.101 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_7, EF-hand_8 0.55 42.0 4.03e-01 85.1% 87.5%
3491974 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.55 39.0 3.89e-01 76.1% 88.6%
4664241 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.55 42.0 3.94e-01 85.1% 82.4%
3879512 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.54 42.0 3.85e-01 86.6% 80.0%
3819659 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.54 40.0 3.87e-01 79.1% 81.3%
3512533 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.54 41.0 3.87e-01 85.1% 81.2%
3407327 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.53 41.0 3.91e-01 85.1% 88.7%
3649970 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.53 39.0 2.93e-01 77.6% 35.9%
3445048 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.53 41.0 3.98e-01 85.1% 90.7%
3550218 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.53 43.0 4.02e-01 92.5% 91.8%
3171688 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.52 40.0 2.93e-01 82.1% 46.7%
3187085 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 38.0 3.50e-01 77.6% 83.3%
3909658 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 38.0 3.12e-01 77.6% 52.8%
3719856 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 42.0 3.29e-01 92.5% 54.8%
3598178 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 38.0 3.57e-01 82.1% 74.1%
3676617 108.1.1.114 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_6, EF-hand_7 0.51 41.0 3.06e-01 89.6% 43.3%
149618 2003.1.5.9 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NNMT_PNMT_TEMT 0.51 40.0 2.83e-01 92.5% 45.9%
D4 medium residues 232-285
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.72 56.0 4.88e-01 85.2% 77.8%
1knzA01 6.10.280.20 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain 0.69 51.0 4.14e-01 79.6% 47.1%
1au7A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 49.0 4.51e-01 85.2% 58.3%
2vwaA00 1.20.58.1330 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein 0.68 56.0 4.75e-01 98.1% 67.7%
3vw4A01 1.10.340.50 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.67 55.0 4.78e-01 98.1% 66.3%
4jd9G00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.67 45.0 3.53e-01 70.4% 34.2%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.67 58.0 4.89e-01 100.0% 67.0%
2ymmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.65 53.0 4.98e-01 100.0% 93.2%
2ebiA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 53.0 5.08e-01 98.1% 81.8%
1k78I00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.37e-01 100.0% 93.1%
1ng6A01 1.10.1510.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain 0.63 49.0 4.17e-01 87.0% 80.2%
1h99A01 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.62 49.0 4.01e-01 88.9% 85.6%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 52.0 4.73e-01 96.3% 69.3%
2h92A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 49.0 3.27e-01 90.7% 40.3%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.58 44.0 3.99e-01 83.3% 64.9%
2eggB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.58 50.0 3.65e-01 98.1% 79.3%
5swvC02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.57 49.0 3.66e-01 96.3% 80.1%
1xo0A01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.57 48.0 3.93e-01 100.0% 54.1%
1gakA00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.56 42.0 3.34e-01 88.9% 83.9%
3bosA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.56 37.0 3.58e-01 72.2% 58.2%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 41.0 3.59e-01 83.3% 60.4%
1irxA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 44.0 3.90e-01 100.0% 82.8%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.68e-01 100.0% 78.8%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 3.29e-01 77.8% 56.4%
8e7cA02 1.10.1840.10 Mainly Alpha › Orthogonal Bundle › main proteinase (3clpro) structure, domain 3 › main proteinase (3clpro) structure, domain 3 0.51 34.0 2.98e-01 74.1% 45.9%
3b0bB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.51 37.0 3.26e-01 87.0% 76.3%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944011 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.77 68.0 5.69e-01 98.1% 78.9%
5042440 610.3.1.1 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.70 60.0 4.23e-01 98.1% 32.0%
143247 592.2.1.1 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like › DUF1871 0.70 54.0 4.72e-01 85.2% 76.8%
3589265 101.1.2.145 ↗ alpha arrays › HTH › HTH › winged helix domain › HHH_4 0.68 57.0 4.93e-01 98.1% 65.6%
3447076 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 58.0 4.98e-01 100.0% 64.4%
4031496 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.67 54.0 4.19e-01 87.0% 78.3%
3422404 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.67 56.0 4.44e-01 96.3% 48.7%
3450546 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 59.0 4.53e-01 98.1% 47.5%
3455132 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.66 57.0 4.49e-01 100.0% 48.3%
5073218 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 52.0 4.49e-01 88.9% 54.4%
3322020 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.66 55.0 4.32e-01 98.1% 44.0%
5044210 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 52.0 4.84e-01 96.3% 70.0%
3826955 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.66 55.0 4.15e-01 98.1% 39.3%
3350998 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 4.99e-01 88.9% 80.0%
4396894 610.3.1.1 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.65 54.0 3.84e-01 98.1% 32.2%
4520559 592.2.1.1 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like › DUF1871 0.64 54.0 4.72e-01 96.3% 68.2%
4190614 610.3.1.1 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.64 53.0 3.85e-01 98.1% 34.3%
2982796 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.64 46.0 2.95e-01 79.6% 14.1%
4990074 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.64 53.0 5.16e-01 94.4% 95.0%
3724068 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 50.0 4.98e-01 94.4% 89.1%
3351474 7010.1.1.0 ↗ alpha arrays › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator 0.64 45.0 4.33e-01 77.8% 75.4%
3237288 101.1.1.102 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 0.64 52.0 4.04e-01 96.3% 43.1%
3211120 101.1.1.102 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 0.64 54.0 4.23e-01 100.0% 45.2%
3784054 130.1.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.63 47.0 3.93e-01 77.8% 56.7%
3426177 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 52.0 5.08e-01 94.4% 85.0%
5044829 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 3.87e-01 83.3% 53.0%
3358320 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.62 47.0 4.75e-01 96.3% 83.6%
3589642 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.62 49.0 4.01e-01 90.7% 89.8%
4337360 3697.1.1.1 ↗ alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.62 51.0 4.60e-01 100.0% 66.3%
5057835 610.3.1.1 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.62 52.0 3.75e-01 98.1% 32.9%
4007858 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.62 52.0 4.27e-01 98.1% 95.2%
5029320 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 4.76e-01 96.3% 80.0%
3956349 191.1.1.15 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_11 0.61 43.0 3.31e-01 72.2% 96.7%
4938494 610.3.1.1 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.61 49.0 4.21e-01 98.1% 56.0%
3588957 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.61 48.0 3.92e-01 90.7% 86.7%
3229498 101.1.1.102 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 0.61 51.0 4.00e-01 98.1% 44.8%
3349606 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 50.0 4.68e-01 94.4% 74.3%
3338988 101.43.1.0 ↗ alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.60 50.0 4.92e-01 96.3% 86.7%
None — 0.60 49.0 3.55e-01 96.3% 32.9%
5054119 610.3.1.0 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.60 51.0 3.80e-01 98.1% 38.6%
3687180 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.60 45.0 4.59e-01 100.0% 94.0%
3975669 162.1.1.0 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD 0.60 50.0 4.18e-01 100.0% 99.0%
3426632 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 46.0 4.50e-01 100.0% 81.7%
3948990 162.1.1.0 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD 0.59 50.0 3.86e-01 100.0% 81.5%
5033493 610.3.1.1 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.58 50.0 3.56e-01 100.0% 52.0%
3817152 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 4.76e-01 100.0% 95.0%
3200940 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 39.0 2.83e-01 72.2% 77.0%
3352882 101.7.1.1 ↗ alpha arrays › HTH › DEK-C › DEK-C › DEK_C 0.56 45.0 4.30e-01 98.1% 75.7%
3321849 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.53 38.0 3.33e-01 96.3% 47.8%