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KY464836.1__AQT27809.1__X__00047

Bact-Vir

KY464836.1__AQT27809.1__X__00047

Identity

Accession:
KY464836 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-15_232-297
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 39.0 4.40e-01 89.6% 67.2%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 38.0 4.38e-01 89.6% 74.5%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 48.0 4.04e-01 94.8% 97.9%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.59 50.0 4.26e-01 96.1% 96.1%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.57 46.0 4.44e-01 88.3% 100.0%
4csqA00 2.30.29.190 Mainly Beta › Roll › PH-domain like › 0.57 49.0 4.35e-01 97.4% 87.6%
3arxA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 43.0 4.18e-01 83.1% 100.0%
1itxA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 42.0 4.37e-01 83.1% 100.0%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.76e-01 89.6% 62.7%
3alfA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 41.0 4.30e-01 83.1% 100.0%
1smpI00 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.54 46.0 4.22e-01 93.5% 98.0%
3a8pB01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.87e-01 89.6% 75.0%
1x4rA01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.54 41.0 4.16e-01 85.7% 81.0%
1jiwI00 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.54 46.0 4.20e-01 96.1% 97.1%
1goiA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 42.0 4.03e-01 85.7% 100.0%
1w9pA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 40.0 4.26e-01 83.1% 100.0%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.64e-01 92.2% 77.1%
3pp2A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.83e-01 89.6% 83.9%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 34.0 3.27e-01 76.6% 54.8%
1bakA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.74e-01 89.6% 63.9%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 37.0 2.51e-01 75.3% 96.1%
4kcaA03 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.52 43.0 4.07e-01 94.8% 100.0%
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 39.0 4.01e-01 85.7% 98.6%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.51 42.0 4.00e-01 96.1% 100.0%
3nbxX04 2.40.128.430 Mainly Beta › Beta Barrel › Lipocalin › 0.51 44.0 3.98e-01 100.0% 93.5%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 39.0 3.72e-01 89.6% 77.8%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.50 38.0 3.60e-01 84.4% 77.9%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3259514 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 48.0 4.16e-01 89.6% 65.0%
3520061 304.9.1.43 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › NCBP3 0.58 49.0 4.28e-01 97.4% 81.6%
3655242 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.58 47.0 3.72e-01 89.6% 65.0%
5054793 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.57 35.0 3.32e-01 75.3% 52.2%
4945021 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 44.0 3.99e-01 85.7% 70.9%
3648024 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.56 46.0 3.94e-01 89.6% 66.4%
3510568 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.56 36.0 3.37e-01 75.3% 52.6%
4950424 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.56 35.0 3.23e-01 75.3% 49.0%
4883688 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.56 42.0 4.25e-01 83.1% 100.0%
210920 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.55 42.0 4.12e-01 84.4% 100.0%
4021508 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.55 35.0 3.25e-01 76.6% 50.0%
3769766 270.1.1.2 beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.54 40.0 3.46e-01 77.9% 64.2%
3932524 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.54 34.0 3.17e-01 75.3% 49.0%
3789093 3519.1.1.1 beta complex topology › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Pex24p 0.54 43.0 3.96e-01 85.7% 84.0%
3401459 270.1.1.2 beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.54 40.0 3.55e-01 77.9% 63.6%
4943894 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 34.0 3.26e-01 75.3% 52.6%
4955531 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.54 42.0 2.79e-01 84.4% 26.5%
4483985 9.7.1.1 beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › Inh 0.53 45.0 4.30e-01 94.8% 100.0%
5036533 3435.1.1.0 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.53 36.0 2.63e-01 94.8% 24.4%
3280045 5.1.4.221 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SGL 0.53 42.0 2.81e-01 85.7% 91.5%
6500 284.2.1.1 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 0.53 39.0 4.04e-01 83.1% 100.0%
4936584 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.52 34.0 3.21e-01 76.6% 53.7%
3583313 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 42.0 3.57e-01 89.6% 68.5%
3176896 270.1.1.2 beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.52 38.0 3.25e-01 77.9% 64.8%
3931499 5.1.4.441 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin-link 0.51 40.0 2.60e-01 84.4% 93.2%
3923721 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.62e-01 84.4% 96.7%
4584002 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.51 41.0 3.72e-01 89.6% 81.9%
3913372 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.50 40.0 2.60e-01 85.7% 98.5%
D2 high residues 20-32_128-224
PDB
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2a8eA00 3.30.930.20 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Protein of unknown function DUF1054 0.63 50.0 4.03e-01 84.5% 79.0%
3pgbA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 43.0 4.30e-01 77.3% 79.3%
4gl6A01 3.10.450.570 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Domain of unknown function (DUF5037), N-terminal subdomain 0.56 38.0 4.34e-01 76.4% 93.9%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.56 50.0 4.64e-01 99.1% 92.1%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 35.0 3.10e-01 100.0% 45.5%
2nq3A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 40.0 3.80e-01 78.2% 80.2%
2q3xA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 45.0 4.19e-01 96.4% 89.4%
4ae8D00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 41.0 3.58e-01 82.7% 91.5%
3lw3B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 34.0 3.21e-01 98.2% 54.0%
4ffuB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 35.0 3.23e-01 100.0% 51.3%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 41.0 2.84e-01 84.5% 42.3%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.51 39.0 3.59e-01 80.9% 62.8%
3ir3A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 35.0 3.38e-01 99.1% 61.9%
3exzB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 36.0 3.29e-01 100.0% 55.8%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 38.0 3.37e-01 80.9% 75.0%
4l8nA03 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 43.0 3.83e-01 97.3% 99.4%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3445404 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.60 42.0 4.44e-01 92.7% 81.0%
3271533 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.58 44.0 4.51e-01 91.8% 81.5%
3278459 881.1.1.33 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF26056 0.58 52.0 4.43e-01 100.0% 82.7%
3651629 708.1.1.1 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.58 45.0 4.60e-01 93.6% 84.5%
3584211 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 42.0 3.86e-01 78.2% 86.2%
3750494 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.55 41.0 3.40e-01 80.0% 62.9%
5038486 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 48.0 4.00e-01 100.0% 85.0%
3593584 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.54 48.0 3.66e-01 100.0% 59.9%
3648327 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.54 45.0 4.19e-01 91.8% 74.3%
3806226 708.1.1.1 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.54 47.0 4.23e-01 99.1% 87.5%
4219536 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.53 40.0 2.78e-01 80.9% 45.8%
3273410 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.53 45.0 3.80e-01 91.8% 57.3%
3369679 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.53 46.0 3.87e-01 95.5% 73.2%
3580851 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.53 42.0 3.46e-01 90.0% 47.0%
3280539 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.53 40.0 3.85e-01 80.9% 96.9%
3440523 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.53 44.0 3.56e-01 92.7% 45.8%
3427427 243.3.1.47 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF7074 0.53 37.0 4.04e-01 79.1% 91.1%
3942438 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 43.0 4.36e-01 90.0% 100.0%
3170490 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.52 46.0 3.65e-01 98.2% 63.5%
3462995 708.1.1.1 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.52 45.0 3.95e-01 98.2% 92.4%
4965879 881.1.1.44 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 0.52 46.0 3.91e-01 100.0% 85.9%
3275961 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.52 47.0 3.87e-01 100.0% 70.0%
3426868 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.52 46.0 3.95e-01 100.0% 62.2%
3806458 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 45.0 4.16e-01 97.3% 94.5%
4570530 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 44.0 4.49e-01 91.8% 100.0%
3431362 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.51 45.0 3.86e-01 99.1% 59.5%
3827979 708.1.1.1 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.51 44.0 4.13e-01 97.3% 92.8%
3818841 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.51 46.0 3.85e-01 100.0% 75.3%
3666444 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.51 44.0 3.75e-01 100.0% 57.3%
3738125 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.51 43.0 3.73e-01 100.0% 58.3%
3875620 883.1.1.1 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.50 37.0 3.12e-01 77.3% 67.4%
4089495 222.1.1.14 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MC_hydratase 0.50 37.0 3.07e-01 100.0% 44.2%
3858387 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 40.0 2.49e-01 88.2% 79.3%
3433417 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.50 36.0 3.73e-01 80.0% 79.0%
D3 high residues 38-125
PDB