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KY472224.1__AQT27664.1__EFP10_29__00029

Bact-Vir

KY472224.1__AQT27664.1__EFP10_29__00029

Identity

Accession:
KY472224 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Saphexavirus› Enterococcus_phage_EF-P10

TaxID: 1958912

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-53
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 62.0 5.39e-01 79.2% 53.8%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 63.0 5.68e-01 81.1% 61.1%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 62.0 6.06e-01 81.1% 75.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 5.53e-01 81.1% 58.7%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 5.97e-01 83.0% 69.8%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 5.73e-01 81.1% 65.7%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 5.78e-01 77.4% 72.4%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 60.0 6.01e-01 79.2% 81.5%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 4.44e-01 79.2% 33.3%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 59.0 5.63e-01 79.2% 68.3%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 58.0 6.00e-01 79.2% 88.0%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 5.71e-01 75.5% 84.0%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.17e-01 86.8% 56.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 5.14e-01 79.2% 66.7%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 4.80e-01 83.0% 48.9%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.75 60.0 3.88e-01 94.3% 19.1%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 4.70e-01 81.1% 48.3%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 53.0 5.84e-01 75.5% 97.6%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.74 54.0 4.50e-01 79.2% 44.8%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 5.22e-01 81.1% 75.0%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 6.15e-01 98.1% 100.0%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.72 62.0 4.16e-01 100.0% 41.7%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.29e-01 94.3% 67.5%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.72 61.0 4.67e-01 98.1% 47.6%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 59.0 4.99e-01 96.2% 54.3%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 4.96e-01 100.0% 52.4%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 4.10e-01 84.9% 57.6%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.62e-01 92.5% 55.8%
2cmpA00 1.10.10.1400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif 0.66 47.0 4.72e-01 79.2% 83.9%
1ywqA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.64 53.0 3.62e-01 96.2% 50.3%
5k3hB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.63 58.0 4.21e-01 100.0% 42.1%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 46.0 4.19e-01 84.9% 83.7%
2v9kA01 1.10.10.2050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 46.0 4.70e-01 77.4% 98.0%
3memA02 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 44.0 2.88e-01 100.0% 63.9%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4008147 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 69.0 6.41e-01 81.1% 67.7%
4009970 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 68.0 6.28e-01 81.1% 67.7%
3942695 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 67.0 6.24e-01 81.1% 67.7%
5043001 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.88 65.0 5.11e-01 79.2% 40.0%
3951084 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 66.0 5.97e-01 81.1% 62.9%
3942478 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 67.0 6.61e-01 83.0% 81.8%
5057202 101.1.3.8 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.86 68.0 6.22e-01 86.8% 65.7%
4031756 101.1.2.645 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.86 63.0 5.37e-01 79.2% 49.4%
3945377 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 66.0 6.17e-01 83.0% 67.7%
4007717 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 65.0 5.59e-01 81.1% 55.0%
3944331 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 65.0 5.58e-01 81.1% 55.0%
3976103 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 66.0 6.13e-01 83.0% 67.7%
4139052 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 68.0 6.02e-01 86.8% 61.3%
3290024 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 65.0 5.58e-01 81.1% 55.0%
3968864 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 64.0 5.69e-01 81.1% 58.7%
3947091 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 67.0 6.44e-01 86.8% 75.0%
3972272 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 64.0 5.68e-01 81.1% 58.7%
3286659 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 66.0 5.94e-01 83.0% 64.3%
4321251 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 64.0 5.56e-01 81.1% 55.7%
3968151 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 64.0 5.43e-01 81.1% 51.8%
3953111 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 65.0 5.90e-01 83.0% 62.9%
4946254 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 59.0 6.32e-01 73.6% 86.7%
4979402 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 62.0 5.98e-01 79.2% 70.0%
3279743 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 68.0 6.19e-01 88.7% 67.1%
3974013 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 63.0 6.09e-01 81.1% 73.3%
4551350 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.83 63.0 5.14e-01 81.1% 45.3%
3941460 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 64.0 6.01e-01 83.0% 67.7%
4349614 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 72.0 7.16e-01 96.2% 92.7%
3944309 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 63.0 6.49e-01 81.1% 88.0%
3289034 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 63.0 5.94e-01 81.1% 69.8%
4071326 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 63.0 5.44e-01 81.1% 55.0%
3962552 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.83 63.0 5.55e-01 81.1% 58.7%
3971414 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 63.0 6.02e-01 81.1% 73.3%
5056682 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 65.0 5.98e-01 86.8% 65.7%
3640035 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 60.0 5.08e-01 79.2% 48.2%
2759 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 63.0 5.91e-01 84.9% 67.7%
4927516 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 61.0 5.85e-01 79.2% 70.0%
4272325 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.81 68.0 4.53e-01 94.3% 23.8%
3980681 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 61.0 5.30e-01 81.1% 55.0%
5078377 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 66.0 6.75e-01 92.5% 98.0%
4522783 101.1.2.715 ↗ alpha arrays › HTH › HTH › winged helix domain › CheF-arch 0.80 59.0 3.67e-01 79.2% 15.0%
4944726 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 66.0 6.39e-01 92.5% 83.3%
4214308 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 67.0 5.73e-01 94.3% 58.8%
3879118 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.80 59.0 5.88e-01 79.2% 76.4%
4159688 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.79 59.0 5.42e-01 81.1% 62.9%
4977403 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 58.0 5.61e-01 79.2% 70.0%
4458444 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 64.0 5.36e-01 92.5% 51.6%
3090474 4020.1.1.0 ↗ a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.79 68.0 5.08e-01 100.0% 39.1%
5003692 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.79 58.0 5.42e-01 79.2% 64.6%
4162857 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.79 56.0 5.79e-01 79.2% 80.0%
4060647 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.78 60.0 5.61e-01 84.9% 67.7%
4470400 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 63.0 5.78e-01 92.5% 68.6%
4937081 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 69.0 6.45e-01 100.0% 80.0%
4031535 101.1.1.275 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.78 61.0 5.92e-01 88.7% 78.3%
5070354 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.77 60.0 5.18e-01 83.0% 55.0%
4244028 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.77 63.0 6.11e-01 92.5% 83.3%
3588052 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.77 59.0 5.11e-01 83.0% 60.0%
3947768 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 58.0 4.89e-01 83.0% 48.9%
3718418 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 56.0 4.79e-01 79.2% 49.4%
5073990 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.76 66.0 5.95e-01 100.0% 78.7%
4936653 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.76 66.0 4.85e-01 100.0% 62.1%
3568862 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.75 57.0 5.33e-01 84.9% 66.2%
5043242 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.75 59.0 5.16e-01 90.6% 57.1%
4998375 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 54.0 4.72e-01 81.1% 55.3%
3753093 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.73 55.0 5.19e-01 84.9% 66.2%
3943462 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 56.0 5.62e-01 86.8% 85.5%
1291824 101.1.1.95 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PhyR_sigma-like 0.73 56.0 5.85e-01 84.9% 93.8%
5041148 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 53.0 4.88e-01 79.2% 60.0%
4993585 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 52.0 5.07e-01 77.4% 68.3%
3857628 101.1.3.29 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.72 54.0 5.07e-01 84.9% 66.2%
3991300 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 63.0 5.42e-01 98.1% 78.8%
3693312 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 52.0 5.06e-01 86.8% 81.7%
3920862 101.1.1.221 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.67 52.0 5.35e-01 84.9% 92.0%
4928395 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.65 46.0 3.44e-01 79.2% 29.3%