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KY472224.1__AQT27700.1__EFP10_65__00065

Bact-Vir

KY472224.1__AQT27700.1__EFP10_65__00065

Identity

Accession:
KY472224 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-44
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4h03A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.72 56.0 3.63e-01 90.5% 41.6%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.72 52.0 4.65e-01 100.0% 55.9%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.68 51.0 3.86e-01 85.7% 34.5%
3k59A01 2.40.50.590 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel 0.68 54.0 4.26e-01 88.1% 97.6%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.68 53.0 3.46e-01 90.5% 41.4%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 45.0 3.53e-01 85.7% 30.6%
1yqyA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 51.0 3.37e-01 90.5% 36.8%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 4.14e-01 100.0% 80.6%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.65 50.0 4.07e-01 90.5% 91.0%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 50.0 4.19e-01 95.2% 48.0%
2j3xA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.65 54.0 3.49e-01 97.6% 36.2%
3lw6A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.65 50.0 3.21e-01 90.5% 73.0%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 47.0 3.66e-01 90.5% 85.5%
2wn5A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.63 52.0 3.47e-01 97.6% 41.2%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 46.0 4.01e-01 81.0% 51.5%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 51.0 4.19e-01 95.2% 76.5%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 41.0 3.25e-01 92.9% 30.5%
2fdoA00 3.30.1970.10 Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like 0.62 46.0 3.62e-01 83.3% 43.0%
2cxcA02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.61 43.0 3.71e-01 85.7% 44.9%
2czrA02 3.90.79.30 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › TBP-interacting protein, C-terminal domain 0.61 42.0 3.12e-01 71.4% 81.7%
5wtzA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.61 49.0 3.21e-01 97.6% 37.6%
1qz8A01 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.61 46.0 3.66e-01 95.2% 41.9%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.60 37.0 2.63e-01 76.2% 17.5%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 44.0 3.26e-01 85.7% 81.2%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.58 44.0 4.17e-01 92.9% 73.2%
2fkbC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 41.0 2.93e-01 85.7% 24.6%
1ru8A02 3.90.1490.10 Alpha Beta › Alpha-Beta Complex › putative n-type atp pyrophosphatase, domain 2 › putative n-type atp pyrophosphatase, domain 2 0.57 43.0 3.47e-01 88.1% 40.7%
3djlA03 2.40.110.20 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › 0.55 41.0 2.97e-01 92.9% 36.5%
5c82A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 39.0 2.68e-01 81.0% 64.7%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.54 43.0 2.70e-01 95.2% 61.6%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.54 39.0 3.46e-01 85.7% 51.4%
3mb5A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 2.76e-01 90.5% 51.3%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 36.0 2.74e-01 73.8% 23.6%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 38.0 3.05e-01 83.3% 33.3%
3o27B00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.53 41.0 3.84e-01 92.9% 68.4%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 37.0 3.83e-01 95.2% 76.3%
2fe0A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 38.0 3.13e-01 95.2% 68.2%
6xw5A01 2.40.510.10 Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses 0.52 39.0 2.83e-01 97.6% 76.3%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.52 35.0 3.34e-01 85.7% 54.5%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.52 39.0 2.76e-01 85.7% 67.8%
3wgtA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 41.0 2.79e-01 100.0% 82.8%
4e98C00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 42.0 3.29e-01 100.0% 78.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3356712 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 61.0 5.97e-01 88.1% 77.8%
5037092 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 56.0 4.85e-01 85.7% 51.4%
3969448 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 57.0 4.32e-01 88.1% 36.2%
3838219 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 54.0 4.28e-01 81.0% 38.8%
3680527 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.72 54.0 4.49e-01 92.9% 45.3%
3423942 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.72 54.0 4.43e-01 92.9% 45.3%
3947390 2.5.1.1 beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase 0.70 56.0 3.87e-01 95.2% 63.0%
3330406 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 54.0 4.93e-01 90.5% 63.3%
4944596 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.68 59.0 4.24e-01 100.0% 38.4%
3941539 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.68 53.0 4.13e-01 97.6% 37.1%
3991702 389.2.1.3 few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors › TIL_2 0.68 55.0 5.25e-01 88.1% 83.3%
3637847 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.67 52.0 4.21e-01 90.5% 87.8%
3645842 4.1.1.162 beta barrels › SH3 › SH3 › SH3 › DUF502 0.67 54.0 4.60e-01 100.0% 87.5%
5057766 4956.1.1.0 a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.67 41.0 3.91e-01 83.3% 46.0%
4945464 3445.1.1.1 beta barrels › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › DUF1684 0.67 50.0 3.51e-01 95.2% 22.9%
4984762 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.66 49.0 3.60e-01 83.3% 29.2%
3368713 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 48.0 3.98e-01 92.9% 44.0%
3348248 3012.1.1.14 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › KH_2 0.66 42.0 3.55e-01 88.1% 38.6%
5012425 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.65 53.0 3.78e-01 95.2% 28.6%
3340613 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.29e-01 90.5% 47.5%
3676628 4.1.1.162 beta barrels › SH3 › SH3 › SH3 › DUF502 0.65 52.0 3.98e-01 100.0% 57.5%
5030033 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.65 45.0 3.96e-01 88.1% 47.7%
3248985 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 49.0 3.52e-01 83.3% 33.1%
3279083 4.6.1.7 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PF26205 0.65 52.0 4.39e-01 92.9% 58.7%
3603063 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.64 55.0 3.44e-01 97.6% 94.9%
3219406 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 49.0 4.76e-01 90.5% 74.0%
4995957 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.63 46.0 3.97e-01 92.9% 48.6%
4937158 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 47.0 4.27e-01 90.5% 58.3%
4975723 3124.1.1.1 beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC 0.63 47.0 4.59e-01 92.9% 74.0%
5051923 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.62 42.0 3.84e-01 85.7% 50.0%
4387110 327.4.1.1 a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.62 53.0 3.95e-01 95.2% 40.0%
4272869 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.60 45.0 3.99e-01 95.2% 53.8%
3211350 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.58 45.0 3.13e-01 88.1% 78.0%
4970825 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.58 40.0 2.81e-01 73.8% 30.7%
3926436 354.1.1.0 few secondary structure elements › Sea anemone toxin k-like › Sea anemone toxin k-related › Sea anemone toxin k-related 0.57 40.0 3.40e-01 73.8% 68.0%
3934890 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.56 45.0 3.25e-01 92.9% 31.7%
5044376 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.56 40.0 2.46e-01 81.0% 81.5%
2121624 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.56 41.0 2.64e-01 97.6% 25.2%
3257563 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.55 46.0 3.64e-01 100.0% 75.8%
3652079 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.55 40.0 3.14e-01 85.7% 33.0%
3484754 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.55 43.0 3.27e-01 92.9% 36.4%
3500621 2500.1.1.2 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.54 42.0 2.41e-01 90.5% 46.3%
4411074 3124.1.1.1 beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC 0.54 39.0 3.84e-01 90.5% 76.0%
3513513 220.1.1.67 beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.54 42.0 3.33e-01 100.0% 39.1%
3505537 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.53 40.0 3.40e-01 85.7% 50.7%
3582440 4.1.1.107 beta barrels › SH3 › SH3 › SH3 › XRN1_D1 0.53 40.0 2.83e-01 97.6% 49.7%
3931384 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.53 42.0 3.16e-01 92.9% 35.5%
3514852 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.52 41.0 3.19e-01 92.9% 38.1%
3513377 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.52 41.0 3.18e-01 92.9% 38.1%
3941125 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.52 42.0 2.94e-01 92.9% 26.9%
3925599 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.52 41.0 2.90e-01 92.9% 27.9%
4934542 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.52 36.0 3.14e-01 85.7% 43.5%
3637570 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.52 40.0 3.00e-01 85.7% 75.0%
3939691 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.51 38.0 3.14e-01 85.7% 40.0%
3312578 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.51 40.0 2.91e-01 92.9% 29.9%
3925981 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.51 40.0 3.03e-01 90.5% 34.5%
3635565 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.51 40.0 3.37e-01 92.9% 52.5%
3932187 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.51 37.0 2.97e-01 85.7% 35.5%
3935948 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.51 41.0 3.05e-01 92.9% 33.9%
3247514 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.50 39.0 3.03e-01 92.9% 39.0%
3934130 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.50 40.0 2.89e-01 92.9% 30.0%
4564327 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.50 36.0 2.98e-01 90.5% 41.0%