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KY499642.1__AQT28160.1__pVa21_219__00219

Bact-Vir

KY499642.1__AQT28160.1__pVa21_219__00219

Identity

Accession:
KY499642 ↗
Kingdom:
phage

Quality

86.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_pVa-21

TaxID: 1958921

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-104
PDB
Domain cluster: rep: term2_saliva_scaffold_1_prodigal-single.1__X__X__00126__D50-128
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xttA00 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.56 42.0 4.32e-01 80.5% 88.2%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.35e-01 71.3% 63.2%
1pzdA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.52 42.0 3.89e-01 92.0% 86.1%
3qz0A00 6.10.250.2300 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 36.0 3.72e-01 75.9% 100.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995817 101.15.1.4 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 0.76 56.0 6.16e-01 81.6% 97.1%
5004560 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.74 46.0 5.51e-01 72.4% 98.2%
3757925 221.1.2.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif 0.65 45.0 4.45e-01 72.4% 73.7%
3974525 230.4.1.1 ↗ a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE 0.51 38.0 3.04e-01 80.5% 93.0%
3440580 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.51 34.0 3.03e-01 70.1% 63.7%