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KY499642.1__AQT28175.1__pVa21_234__00234
Bact-VirKY499642.1__AQT28175.1__pVa21_234__00234
Identity
- Accession:
- KY499642 ↗
- Kingdom:
- phage
Quality
94.0
mean pLDDT
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-136
Domain cluster:
rep: NC_041911.1__YP_009598942.1__FDH28_gp172__00249__D19-147
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4z7fB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.62 | 49.0 | 4.38e-01 | 84.6% | 69.6% |
| 1ldjA04 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.60 | 34.0 | 3.45e-01 | 94.0% | 53.9% |
| 4rfsS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.56 | 42.0 | 3.71e-01 | 82.1% | 70.1% |
| 3u66A00 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.55 | 44.0 | 3.95e-01 | 85.5% | 70.2% |
| 8st7C01 | 1.10.4140.10 | Mainly Alpha › Orthogonal Bundle › effector protein (NleL) fold › effector protein (NleL) | 0.55 | 44.0 | 3.68e-01 | 85.5% | 97.1% |
| 1vsgA02 | 1.10.470.10 | Mainly Alpha › Orthogonal Bundle › Variant Surface Glycoprotein, subunit A; domain 2 › Variant Surface Glycoprotein, subunit A, domain 2 | 0.55 | 42.0 | 3.89e-01 | 82.9% | 81.1% |
| 4rv5A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 49.0 | 4.04e-01 | 99.1% | 94.3% |
| 7k0yA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 41.0 | 2.77e-01 | 81.2% | 31.8% |
| 5xfaA04 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.53 | 31.0 | 3.53e-01 | 80.3% | 78.8% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.52 | 41.0 | 4.09e-01 | 86.3% | 87.2% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 38.0 | 2.74e-01 | 79.5% | 81.5% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.51 | 44.0 | 4.23e-01 | 95.7% | 83.3% |
| 2ajrA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 39.0 | 3.02e-01 | 82.9% | 60.0% |
| 4maaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 45.0 | 3.78e-01 | 100.0% | 90.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5025769 | 1076.1.1.0 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related | 0.64 | 49.0 | 4.04e-01 | 80.3% | 59.0% |
| 3279558 | 192.31.1.5 ↗ | alpha bundles › Long alpha-hairpin › CP12 › CP12 › DUF4254 | 0.61 | 43.0 | 4.48e-01 | 74.4% | 97.3% |
| 3448065 | 101.1.10.45 ↗ | alpha arrays › HTH › HTH › Cyclin-like › PIR2-like_helical | 0.59 | 42.0 | 3.59e-01 | 75.2% | 100.0% |
| 5003451 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.57 | 40.0 | 4.00e-01 | 71.8% | 76.0% |
| 3345767 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.57 | 43.0 | 4.30e-01 | 81.2% | 80.8% |
| 3924049 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.54 | 40.0 | 3.45e-01 | 82.9% | 49.2% |
| 4981140 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.52 | 40.0 | 3.78e-01 | 81.2% | 90.7% |
| 4021922 | 109.4.1.1320 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_10, TPR_12 | 0.51 | 37.0 | 3.42e-01 | 76.9% | 81.3% |
| 3484872 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.51 | 38.0 | 3.64e-01 | 78.6% | 75.6% |