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KY549443.1__APZ81972.1__EFP01_045__00045

Bact-Vir

KY549443.1__APZ81972.1__EFP01_045__00045

Identity

Accession:
KY549443 ↗
Kingdom:
phage

Quality

80.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Schiekvirus› Enterococcus_phage_EFP01

TaxID: 1926594

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-45
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24608.3 best PDDEXK_15 37.3 3.90e-09 73.8% 17.1%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fefA00 3.90.1820.10 Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase 0.81 59.0 3.31e-01 76.2% 35.5%
4fbwA02 3.30.110.110 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Mre11, capping domain 0.80 63.0 4.68e-01 85.7% 70.6%
1ck7A01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.60 45.0 2.87e-01 83.3% 28.5%
3mkkA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 44.0 2.62e-01 100.0% 10.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5037280 212.1.1.22 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Topo-VIb_trans 0.80 58.0 3.72e-01 81.0% 18.0%
3592900 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 70.0 4.20e-01 100.0% 28.0%
3726384 604.4.1.0 ↗ alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP 0.72 54.0 4.20e-01 81.0% 44.4%
3312436 148.1.3.173 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 0.66 45.0 3.82e-01 71.4% 90.0%