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KY549443.1__APZ82100.1__EFP01_173__00173
Bact-VirKY549443.1__APZ82100.1__EFP01_173__00173
Identity
- Accession:
- KY549443 ↗
- Kingdom:
- phage
Quality
85.1
mean pLDDT
Taxonomy
TaxID: 1926594
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-57
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.68 | 49.0 | 5.23e-01 | 82.1% | 87.5% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 49.0 | 5.08e-01 | 82.1% | 81.1% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 50.0 | 4.59e-01 | 82.1% | 70.0% |
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.64 | 35.0 | 3.25e-01 | 73.2% | 40.6% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 49.0 | 4.15e-01 | 82.1% | 64.0% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 48.0 | 4.47e-01 | 82.1% | 77.1% |
| 4i8iA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.62 | 49.0 | 3.21e-01 | 89.3% | 30.5% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 48.0 | 4.67e-01 | 82.1% | 80.6% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 43.0 | 2.87e-01 | 94.6% | 17.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 47.0 | 4.60e-01 | 82.1% | 75.8% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.42e-01 | 85.7% | 80.0% |
| 3bc9A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 43.0 | 3.68e-01 | 75.0% | 73.1% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 45.0 | 4.30e-01 | 82.1% | 81.8% |
| 3oxhA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 39.0 | 2.94e-01 | 76.8% | 28.5% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.58 | 46.0 | 4.21e-01 | 87.5% | 84.2% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 42.0 | 3.19e-01 | 76.8% | 67.7% |
| 3bdlA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 44.0 | 3.10e-01 | 82.1% | 79.5% |
| 3s5wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 42.0 | 2.47e-01 | 76.8% | 35.6% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 42.0 | 3.83e-01 | 85.7% | 60.3% |
| 3ic9A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 40.0 | 3.13e-01 | 76.8% | 69.7% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.55 | 41.0 | 4.03e-01 | 82.1% | 87.3% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 43.0 | 3.89e-01 | 87.5% | 84.8% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 49.0 | 4.46e-01 | 100.0% | 86.3% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 47.0 | 4.35e-01 | 98.2% | 94.4% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 39.0 | 2.75e-01 | 76.8% | 40.5% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 40.0 | 3.75e-01 | 94.6% | 64.8% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 47.0 | 4.33e-01 | 98.2% | 94.4% |
| 3v0aB03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 36.0 | 2.53e-01 | 92.9% | 19.5% |
| 1xf1A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.38e-01 | 85.7% | 83.2% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 44.0 | 3.48e-01 | 92.9% | 52.6% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 42.0 | 4.49e-01 | 87.5% | 100.0% |
| 1whoA00 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.52 | 40.0 | 3.52e-01 | 91.1% | 79.8% |
| 2b3yA05 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.51 | 37.0 | 2.47e-01 | 78.6% | 87.2% |
| 1xakA00 | 2.60.40.1550 | Mainly Beta › Sandwich › Immunoglobulin-like › SARS coronavirus X4 | 0.51 | 36.0 | 3.45e-01 | 76.8% | 69.1% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 35.0 | 3.37e-01 | 85.7% | 62.1% |
| 4ew6A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 41.0 | 3.03e-01 | 100.0% | 37.0% |
| 2d7vB00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 39.0 | 2.89e-01 | 85.7% | 41.2% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081654 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.78 | 64.0 | 6.30e-01 | 100.0% | 83.3% |
| 3460576 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.65 | 42.0 | 2.70e-01 | 78.6% | 13.8% |
| 5031165 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.63 | 48.0 | 4.49e-01 | 82.1% | 72.9% |
| 4679871 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.63 | 34.0 | 3.04e-01 | 73.2% | 35.0% |
| 4166376 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 44.0 | 4.05e-01 | 75.0% | 64.0% |
| 3855038 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.62 | 48.0 | 3.37e-01 | 82.1% | 28.7% |
| 4935709 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.61 | 45.0 | 3.62e-01 | 78.6% | 71.4% |
| 5067186 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.60 | 44.0 | 3.70e-01 | 78.6% | 78.9% |
| 4424497 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.60 | 44.0 | 3.67e-01 | 78.6% | 61.1% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.59 | 47.0 | 4.25e-01 | 85.7% | 64.0% |
| 3289062 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 48.0 | 4.21e-01 | 100.0% | 61.1% |
| 3404643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 4.21e-01 | 83.9% | 68.6% |
| 3368743 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.58 | 45.0 | 4.39e-01 | 83.9% | 78.3% |
| 4305565 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.56 | 41.0 | 3.49e-01 | 78.6% | 60.0% |
| 5028283 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.56 | 45.0 | 3.54e-01 | 96.4% | 52.1% |
| 4946484 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 2.97e-01 | 76.8% | 82.7% |
| 2137686 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.56 | 40.0 | 3.02e-01 | 76.8% | 70.1% |
| 3721973 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 44.0 | 4.00e-01 | 85.7% | 64.0% |
| 3335818 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 3.28e-01 | 75.0% | 71.0% |
| 5059308 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.55 | 42.0 | 2.83e-01 | 85.7% | 91.8% |
| 5062859 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.55 | 46.0 | 3.59e-01 | 94.6% | 83.2% |
| 5014724 | 295.1.1.51 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C | 0.55 | 37.0 | 3.15e-01 | 87.5% | 40.0% |
| 4999858 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 46.0 | 3.15e-01 | 96.4% | 40.9% |
| 3941717 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 40.0 | 3.46e-01 | 78.6% | 79.5% |
| 3588447 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.54 | 43.0 | 2.87e-01 | 91.1% | 29.2% |
| 4958552 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 41.0 | 3.24e-01 | 82.1% | 55.7% |
| 5046745 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.54 | 41.0 | 3.47e-01 | 87.5% | 91.4% |
| 3576726 | 5.1.2.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Apyrase | 0.53 | 43.0 | 2.61e-01 | 94.6% | 15.8% |
| 4971532 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 47.0 | 4.40e-01 | 98.2% | 88.6% |
| 3547884 | 389.1.2.7 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › THBD | 0.53 | 42.0 | 4.00e-01 | 92.9% | 90.0% |
| 4196255 | 10.1.1.25 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N | 0.53 | 36.0 | 2.54e-01 | 92.9% | 19.5% |
| 4986904 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.53 | 44.0 | 2.89e-01 | 94.6% | 35.0% |
| 4593997 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 47.0 | 4.51e-01 | 100.0% | 95.4% |
| 4982277 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 39.0 | 3.81e-01 | 83.9% | 75.4% |
| 4373021 | 2.4.1.6 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal | 0.52 | 44.0 | 3.64e-01 | 92.9% | 55.6% |
| 2754129 | 11.1.1.343 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ScpA_C | 0.52 | 41.0 | 3.38e-01 | 87.5% | 82.5% |
| 3599004 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 40.0 | 2.55e-01 | 87.5% | 32.4% |
| 4375892 | 11.1.4.24 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarbopepD_reg_2 | 0.52 | 43.0 | 3.73e-01 | 98.2% | 71.6% |
| 329360 | 3534.1.1.2 ↗ | beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF1285_C | 0.51 | 43.0 | 3.60e-01 | 96.4% | 55.4% |
D2
high
residues 67-172
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294__D106-220
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r3pB00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.76 | 64.0 | 6.69e-01 | 100.0% | 98.0% |
| 1vsrA00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.74 | 69.0 | 6.34e-01 | 100.0% | 88.1% |
| 4wpgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 61.0 | 4.83e-01 | 99.1% | 80.9% |
| 1z8hA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.65 | 58.0 | 4.72e-01 | 99.1% | 92.6% |
| 6p4wB01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.65 | 59.0 | 5.84e-01 | 99.1% | 100.0% |
| 1khtB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 58.0 | 4.79e-01 | 100.0% | 91.6% |
| 4da2A02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.63 | 53.0 | 4.75e-01 | 92.5% | 94.7% |
| 1w6uD00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 55.0 | 4.09e-01 | 99.1% | 73.4% |
| 3v9pB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 56.0 | 4.49e-01 | 99.1% | 94.6% |
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 53.0 | 5.02e-01 | 93.4% | 93.6% |
| 6m9uB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 55.0 | 4.20e-01 | 100.0% | 77.2% |
| 2e87A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 54.0 | 4.49e-01 | 100.0% | 80.5% |
| 3a4lB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 54.0 | 4.59e-01 | 100.0% | 86.0% |
| 3dciA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.60 | 53.0 | 4.34e-01 | 100.0% | 96.1% |
| 4q34A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 52.0 | 3.76e-01 | 98.1% | 84.4% |
| 7b3aA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 42.0 | 3.73e-01 | 73.6% | 67.8% |
| 5jszA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 3.60e-01 | 92.5% | 64.3% |
| 5ktkA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 3.38e-01 | 99.1% | 49.1% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 51.0 | 4.72e-01 | 98.1% | 91.0% |
| 5awhA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 51.0 | 4.34e-01 | 100.0% | 72.6% |
| 4a8jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 49.0 | 3.61e-01 | 94.3% | 79.1% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 44.0 | 3.99e-01 | 86.8% | 86.2% |
| 2hxsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 4.13e-01 | 99.1% | 87.6% |
| 3ktcA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.55 | 46.0 | 3.34e-01 | 94.3% | 78.2% |
| 5gizA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 49.0 | 4.65e-01 | 100.0% | 81.4% |
| 3k93A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.54 | 47.0 | 3.72e-01 | 96.2% | 55.6% |
| 3fynA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 39.0 | 3.48e-01 | 76.4% | 59.2% |
| 4r5qA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.53 | 47.0 | 3.73e-01 | 96.2% | 74.4% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 40.0 | 3.74e-01 | 86.8% | 63.0% |
| 1xmtA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 40.0 | 4.20e-01 | 80.2% | 91.6% |
| 1eceA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 44.0 | 3.19e-01 | 98.1% | 92.7% |
| 6n2aB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.52 | 41.0 | 3.28e-01 | 87.7% | 89.3% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 4.02e-01 | 100.0% | 92.0% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 38.0 | 4.07e-01 | 81.1% | 95.3% |
| 4o5aA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 38.0 | 3.55e-01 | 80.2% | 71.2% |
| 7pk0A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 38.0 | 3.58e-01 | 84.9% | 64.6% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 42.0 | 3.30e-01 | 92.5% | 96.6% |
| 2p0wA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 40.0 | 3.72e-01 | 84.0% | 69.9% |
| 2cjwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 44.0 | 3.80e-01 | 100.0% | 82.6% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027476 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.81 | 69.0 | 7.16e-01 | 99.1% | 96.0% |
| 4940595 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.79 | 64.0 | 6.63e-01 | 99.1% | 91.0% |
| 5022187 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.79 | 73.0 | 6.38e-01 | 100.0% | 87.1% |
| 3258001 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.79 | 72.0 | 6.52e-01 | 98.1% | 93.6% |
| 3163838 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.78 | 68.0 | 6.67e-01 | 100.0% | 86.1% |
| 5080733 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.77 | 71.0 | 6.56e-01 | 99.1% | 86.2% |
| 3281852 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.76 | 71.0 | 6.29e-01 | 100.0% | 77.9% |
| 4271425 | 2008.1.1.81 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2726 | 0.73 | 67.0 | 5.80e-01 | 100.0% | 69.4% |
| 3962618 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 63.0 | 6.03e-01 | 100.0% | 83.3% |
| 3287888 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 59.0 | 4.91e-01 | 87.7% | 66.9% |
| 4027159 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.71 | 66.0 | 6.40e-01 | 100.0% | 91.3% |
| 3959070 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 62.0 | 5.56e-01 | 100.0% | 68.7% |
| 5056125 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.70 | 64.0 | 5.98e-01 | 100.0% | 87.7% |
| 5028457 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 60.0 | 5.40e-01 | 97.2% | 69.3% |
| 3603694 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 63.0 | 5.91e-01 | 100.0% | 90.0% |
| 3235677 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 58.0 | 5.63e-01 | 91.5% | 95.0% |
| 4946865 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 61.0 | 6.03e-01 | 94.3% | 99.1% |
| 4995722 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 58.0 | 5.96e-01 | 99.1% | 99.0% |
| 4954232 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 48.0 | 5.42e-01 | 79.2% | 100.0% |
| 5074941 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 62.0 | 6.11e-01 | 100.0% | 98.2% |
| 2721398 | 2008.1.1.34 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc | 0.67 | 60.0 | 5.66e-01 | 99.1% | 97.7% |
| 5074968 | 2008.1.1.122 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII-MboI | 0.67 | 56.0 | 4.97e-01 | 88.7% | 76.6% |
| 4943200 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.66 | 59.0 | 4.75e-01 | 100.0% | 88.1% |
| 4983302 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 60.0 | 5.48e-01 | 100.0% | 90.0% |
| 4027941 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 52.0 | 5.53e-01 | 83.0% | 100.0% |
| 5057713 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.65 | 59.0 | 5.52e-01 | 99.1% | 93.8% |
| 4105792 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.65 | 58.0 | 4.68e-01 | 100.0% | 91.9% |
| 3223694 | 2008.1.1.94 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5614 | 0.65 | 57.0 | 4.76e-01 | 93.4% | 61.1% |
| 4975459 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 58.0 | 5.10e-01 | 98.1% | 88.4% |
| 3952574 | 2004.1.1.202 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 | 0.65 | 58.0 | 4.99e-01 | 100.0% | 90.0% |
| 5076295 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.65 | 58.0 | 5.33e-01 | 98.1% | 95.6% |
| 5035773 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.65 | 59.0 | 5.30e-01 | 99.1% | 78.6% |
| 5057728 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 57.0 | 5.43e-01 | 96.2% | 95.2% |
| 4960251 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.64 | 56.0 | 5.26e-01 | 98.1% | 88.0% |
| 4970960 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 56.0 | 4.99e-01 | 98.1% | 83.9% |
| 4991917 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.64 | 58.0 | 5.30e-01 | 100.0% | 81.4% |
| 3509755 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 58.0 | 5.16e-01 | 100.0% | 74.0% |
| 4402765 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 56.0 | 5.27e-01 | 98.1% | 90.7% |
| 4947569 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 58.0 | 5.07e-01 | 100.0% | 83.2% |
| 4946571 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.63 | 57.0 | 4.55e-01 | 99.1% | 62.0% |
| 5015831 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.62 | 56.0 | 5.19e-01 | 100.0% | 98.5% |
| 4933915 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.62 | 57.0 | 4.96e-01 | 100.0% | 76.9% |
| 4956304 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 55.0 | 4.47e-01 | 98.1% | 68.0% |
| 4941691 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.62 | 57.0 | 4.98e-01 | 100.0% | 77.3% |
| 4209016 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 56.0 | 4.31e-01 | 98.1% | 48.7% |
| 4604110 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 57.0 | 4.74e-01 | 100.0% | 63.3% |
| 5079137 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.62 | 56.0 | 5.07e-01 | 99.1% | 97.9% |
| 4977513 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.61 | 53.0 | 4.66e-01 | 94.3% | 85.2% |
| 4945329 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.61 | 54.0 | 4.29e-01 | 98.1% | 65.1% |
| 4411889 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 56.0 | 4.37e-01 | 100.0% | 50.9% |
| 5071081 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 53.0 | 4.67e-01 | 95.3% | 82.6% |
| 4968040 | 2008.1.1.235 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26618 | 0.61 | 54.0 | 5.07e-01 | 98.1% | 95.4% |
| 3506045 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 54.0 | 4.38e-01 | 95.3% | 54.1% |
| 4956059 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 50.0 | 4.28e-01 | 88.7% | 71.5% |
| 4304580 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 53.0 | 4.06e-01 | 96.2% | 55.4% |
| 3343894 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.60 | 54.0 | 4.43e-01 | 100.0% | 69.7% |
| 4983658 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.59 | 51.0 | 4.61e-01 | 94.3% | 87.6% |
| 3603246 | 2007.1.14.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › DUF2112 | 0.58 | 50.0 | 4.56e-01 | 98.1% | 88.0% |
| 5073108 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.58 | 51.0 | 4.35e-01 | 100.0% | 91.1% |
| 3642249 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.57 | 40.0 | 3.85e-01 | 99.1% | 64.2% |
| 3386658 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.56 | 50.0 | 4.21e-01 | 96.2% | 78.3% |
| 4350516 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 48.0 | 4.90e-01 | 96.2% | 96.1% |
| 4670340 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 49.0 | 4.85e-01 | 96.2% | 91.2% |
| 2330444 | 292.2.1.15 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › PF29923 | 0.56 | 44.0 | 4.14e-01 | 84.0% | 87.7% |
| 4999640 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.56 | 49.0 | 3.93e-01 | 96.2% | 58.6% |
| 4999907 | 2484.1.1.337 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR | 0.56 | 49.0 | 3.67e-01 | 98.1% | 64.7% |
| 4063889 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 49.0 | 4.81e-01 | 97.2% | 95.6% |
| 4180620 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.55 | 44.0 | 3.69e-01 | 95.3% | 49.7% |
| 4329875 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 48.0 | 4.56e-01 | 96.2% | 88.8% |
| 4996735 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 48.0 | 4.06e-01 | 98.1% | 76.7% |
| 3226005 | 2004.1.1.163 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 | 0.55 | 49.0 | 4.17e-01 | 99.1% | 90.0% |
| 3492867 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 48.0 | 3.86e-01 | 99.1% | 80.9% |
| 4306163 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 47.0 | 4.57e-01 | 96.2% | 87.0% |
| 4667311 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 47.0 | 4.65e-01 | 97.2% | 92.2% |
| 4963302 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.54 | 43.0 | 3.93e-01 | 85.8% | 87.9% |
| 4651783 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.53 | 47.0 | 4.37e-01 | 97.2% | 81.2% |
| 3483378 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 45.0 | 3.75e-01 | 99.1% | 83.4% |
| 3644199 | 2485.1.1.137 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DAHP_synth_2 | 0.52 | 32.0 | 3.22e-01 | 80.2% | 60.0% |
| 4310493 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 45.0 | 3.48e-01 | 96.2% | 62.9% |
| 3609528 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 45.0 | 3.70e-01 | 98.1% | 83.9% |
| 3496136 | 2003.1.1.70 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N_2 | 0.50 | 42.0 | 3.31e-01 | 94.3% | 71.8% |
D3
high
residues 179-238
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 56.0 | 6.15e-01 | 75.0% | 93.8% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.77 | 58.0 | 5.57e-01 | 80.0% | 72.1% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 52.0 | 4.56e-01 | 98.3% | 50.6% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 53.0 | 4.80e-01 | 100.0% | 57.5% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 5.03e-01 | 95.0% | 69.2% |
| 1w98B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 54.0 | 4.08e-01 | 100.0% | 33.3% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.71 | 53.0 | 4.58e-01 | 100.0% | 51.1% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 49.0 | 5.02e-01 | 75.0% | 98.2% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.68 | 54.0 | 4.13e-01 | 100.0% | 38.9% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 5.16e-01 | 100.0% | 81.0% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 47.0 | 4.79e-01 | 76.7% | 76.3% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 44.0 | 4.38e-01 | 70.0% | 78.7% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 47.0 | 4.35e-01 | 81.7% | 60.5% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 47.0 | 4.58e-01 | 83.3% | 70.8% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 54.0 | 4.66e-01 | 95.0% | 59.6% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 53.0 | 4.50e-01 | 95.0% | 57.3% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 4.01e-01 | 90.0% | 54.5% |
| 2whnA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.60 | 42.0 | 3.51e-01 | 73.3% | 85.5% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 53.0 | 4.39e-01 | 100.0% | 61.3% |
| 4p1wD00 | 1.10.10.2570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 40.0 | 3.95e-01 | 71.7% | 90.9% |
| 4ga6A02 | 1.20.970.50 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › | 0.59 | 39.0 | 2.95e-01 | 70.0% | 33.6% |
| 2pjpA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 4.11e-01 | 83.3% | 73.8% |
| 2r8qA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.58 | 41.0 | 2.63e-01 | 76.7% | 70.1% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 39.0 | 4.19e-01 | 70.0% | 100.0% |
| 7ep3A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 42.0 | 2.88e-01 | 81.7% | 34.3% |
| 2oebA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.57 | 49.0 | 3.71e-01 | 100.0% | 85.5% |
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 3.98e-01 | 100.0% | 57.4% |
| 3h5qA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.55 | 37.0 | 3.57e-01 | 70.0% | 70.0% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.55 | 46.0 | 4.31e-01 | 100.0% | 75.0% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 40.0 | 3.77e-01 | 88.3% | 70.9% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 39.0 | 3.66e-01 | 91.7% | 68.0% |
| 1a00B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 3.35e-01 | 100.0% | 64.4% |
| 3nqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.50 | 39.0 | 3.18e-01 | 95.0% | 95.2% |
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.50 | 41.0 | 3.28e-01 | 100.0% | 63.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3503859 | 101.1.1.52 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD | 0.85 | 57.0 | 5.99e-01 | 70.0% | 76.4% |
| 3999777 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 54.0 | 6.08e-01 | 70.0% | 93.3% |
| 3284253 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.81 | 53.0 | 4.61e-01 | 93.3% | 45.6% |
| 3986748 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.80 | 57.0 | 4.92e-01 | 91.7% | 50.0% |
| 2556 | 101.1.1.43 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Mor | 0.78 | 56.0 | 6.15e-01 | 75.0% | 93.8% |
| 3946899 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.78 | 54.0 | 4.65e-01 | 91.7% | 46.3% |
| 3291721 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.77 | 55.0 | 4.67e-01 | 93.3% | 46.0% |
| 3787936 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 51.0 | 5.12e-01 | 70.0% | 70.0% |
| 4624372 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.75 | 55.0 | 4.69e-01 | 98.3% | 49.5% |
| 4578266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 49.0 | 5.42e-01 | 75.0% | 91.1% |
| 4862439 | 101.1.1.71 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › KORA | 0.72 | 54.0 | 4.45e-01 | 100.0% | 44.9% |
| 4603338 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.69 | 52.0 | 5.01e-01 | 100.0% | 70.0% |
| 3725613 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.64 | 51.0 | 4.33e-01 | 90.0% | 62.9% |
| 3620216 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 50.0 | 4.51e-01 | 93.3% | 63.5% |
| 5076914 | 563.2.1.0 ↗ | alpha bundles › ATPD N-terminal domain-like › Cas Cmr5-like › Cas Cmr5-like | 0.61 | 47.0 | 3.77e-01 | 83.3% | 87.5% |
| 3573627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 48.0 | 3.83e-01 | 95.0% | 67.2% |
| 5012848 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.56 | 47.0 | 3.49e-01 | 95.0% | 72.7% |
| 5035734 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.56 | 41.0 | 3.25e-01 | 78.3% | 96.8% |
| 3589532 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 44.0 | 3.87e-01 | 96.7% | 56.1% |
| 3603382 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.55 | 45.0 | 3.25e-01 | 100.0% | 30.3% |
| 3894983 | 4156.1.1.2 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C | 0.55 | 43.0 | 3.19e-01 | 95.0% | 46.2% |
| 3188614 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.52 | 43.0 | 4.04e-01 | 95.0% | 88.0% |
| 4988250 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.51 | 43.0 | 2.77e-01 | 100.0% | 55.3% |
| 3165587 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.51 | 41.0 | 3.00e-01 | 93.3% | 77.4% |
| 4952389 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.51 | 42.0 | 3.20e-01 | 100.0% | 71.5% |
| 4931618 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.50 | 44.0 | 3.04e-01 | 100.0% | 38.1% |
| 3198009 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.50 | 38.0 | 3.42e-01 | 81.7% | 77.6% |