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KY593455.1__ARB05870.1__fHeYen901_97__00096

Bact-Vir

KY593455.1__ARB05870.1__fHeYen901_97__00096

Identity

Accession:
KY593455 ↗
Kingdom:
phage

Quality

78.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Tegunavirus› Yersinia_phage_fHe-Yen9-01

TaxID: 1965363

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-85
PDB
Domain cluster: rep: MZ520832.1__QYC52576.1__X__00146__D15-83
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24144.2 best Phage_tudor 35.1 1.50e-08 98.7% 71.9%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 43.0 4.47e-01 87.0% 71.2%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 39.0 4.53e-01 79.2% 88.5%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.63 37.0 3.40e-01 74.0% 43.1%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 37.0 4.50e-01 74.0% 93.8%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 38.0 4.37e-01 74.0% 83.9%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.63 54.0 4.21e-01 97.4% 88.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.62e-01 80.5% 73.8%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 43.0 4.52e-01 87.0% 83.6%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 50.0 4.07e-01 94.8% 87.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.61 40.0 4.61e-01 92.2% 96.3%
8p2aA01 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.60 42.0 4.10e-01 75.3% 96.6%
8p2bA01 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.58 41.0 4.08e-01 74.0% 96.2%
4kc5C03 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.57 41.0 2.76e-01 76.6% 39.9%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.57 45.0 3.57e-01 88.3% 78.3%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.55 37.0 4.03e-01 77.9% 81.8%
5tkwA01 3.30.420.380 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.54 40.0 3.22e-01 81.8% 87.6%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 3.98e-01 72.7% 80.0%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 38.0 2.98e-01 75.3% 77.8%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 35.0 3.29e-01 85.7% 51.5%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 38.0 4.16e-01 79.2% 96.6%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.53 43.0 3.88e-01 98.7% 63.3%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 43.0 2.83e-01 92.2% 90.7%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.52 40.0 2.99e-01 87.0% 83.6%
3h7oA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 34.0 3.11e-01 85.7% 46.4%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.51 41.0 3.92e-01 85.7% 74.7%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.12e-01 90.9% 69.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 42.0 4.04e-01 92.2% 83.3%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3914746 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.70 42.0 4.44e-01 72.7% 67.1%
3510526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 43.0 5.04e-01 74.0% 89.1%
3877485 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 44.0 4.31e-01 93.5% 61.2%
3697694 4.1.1.288 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6540 0.66 54.0 4.71e-01 89.6% 84.7%
3700770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 47.0 5.25e-01 85.7% 96.7%
4191690 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.65 37.0 4.15e-01 72.7% 74.1%
3749631 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.65 41.0 3.74e-01 80.5% 47.6%
3592075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.47e-01 75.3% 77.6%
4321173 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.64 37.0 4.21e-01 75.3% 77.6%
2321269 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.63 47.0 4.62e-01 80.5% 73.8%
2841854 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.62 42.0 3.55e-01 70.1% 97.0%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 41.0 4.39e-01 84.4% 80.0%
3770448 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.62 47.0 3.69e-01 83.1% 99.4%
3819740 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.62 44.0 4.24e-01 76.6% 92.2%
3805804 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.61 44.0 4.29e-01 76.6% 97.6%
3455944 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 46.0 3.72e-01 84.4% 91.9%
3721314 219.1.1.93 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.60 51.0 4.48e-01 93.5% 86.1%
3241614 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 49.0 4.06e-01 93.5% 92.4%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.60 41.0 4.73e-01 89.6% 100.0%
4317167 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.59 43.0 4.31e-01 84.4% 75.0%
3621272 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.59 47.0 3.82e-01 84.4% 63.7%
3430539 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.58 44.0 2.86e-01 84.4% 67.8%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.23e-01 93.5% 76.2%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 41.0 3.97e-01 74.0% 98.8%
3356605 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 42.0 3.97e-01 75.3% 81.1%
4680746 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.58 39.0 4.00e-01 71.4% 73.3%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 45.0 4.19e-01 84.4% 80.0%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 44.0 4.44e-01 84.4% 95.0%
4220126 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 45.0 4.38e-01 90.9% 77.6%
3173222 4075.1.1.0 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain 0.57 41.0 3.63e-01 76.6% 94.8%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.35e-01 85.7% 85.3%
3197517 219.1.1.129 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF7770 0.55 47.0 4.17e-01 98.7% 84.7%
4253671 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.55 40.0 3.26e-01 79.2% 80.6%
4555816 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 44.0 4.33e-01 93.5% 80.0%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.55 43.0 4.21e-01 85.7% 80.0%
1545879 4.1.1.120 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_16 0.54 38.0 3.46e-01 72.7% 100.0%
3476336 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.54 41.0 4.34e-01 84.4% 91.4%
3398765 5087.2.1.2 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.54 39.0 2.82e-01 79.2% 81.6%
3618227 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.54 45.0 3.29e-01 97.4% 78.7%
4033182 4.1.1.61 ↗ beta barrels › SH3 › SH3 › SH3 › KapB 0.53 45.0 3.99e-01 100.0% 74.2%
3828371 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.53 40.0 3.86e-01 84.4% 71.8%
3342793 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.53 46.0 3.48e-01 98.7% 52.1%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 42.0 4.10e-01 92.2% 80.0%
3516347 861.1.1.1 ↗ a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › Mago_nashi 0.52 35.0 2.88e-01 70.1% 94.2%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 42.0 3.07e-01 90.9% 34.2%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 42.0 3.12e-01 92.2% 35.3%
3625149 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.51 41.0 4.06e-01 85.7% 83.7%
3389887 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.51 41.0 3.98e-01 85.7% 78.8%
3806777 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.51 39.0 3.96e-01 84.4% 85.3%
3697493 5.1.5.70 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › TFIIIC_delta 0.50 39.0 2.54e-01 87.0% 66.8%
4655719 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.50 35.0 3.41e-01 75.3% 68.9%