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KY622015.1__ARB06238.1__SppYZU01_02__00002

Bact-Vir

KY622015.1__ARB06238.1__SppYZU01_02__00002

Identity

Accession:
KY622015 ↗
Kingdom:
phage

Quality

80.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shewanella_phage_SppYZU01

TaxID: 1965372

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 227-279
PDB
Domain cluster: rep: OL631484.1__WCD44068.1__ECML606-1_000117__00117__D26-84
D2 medium residues 18-72
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 38.0 3.57e-01 70.9% 80.9%
2zqeA00 3.30.1370.110 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 39.0 3.55e-01 76.4% 98.8%
5aweA01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.55 42.0 3.35e-01 100.0% 39.7%
1vr9A02 3.10.20.750 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 38.0 3.84e-01 78.2% 96.4%
7xnzA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 44.0 3.48e-01 100.0% 62.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4930705 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.56 38.0 3.61e-01 70.9% 84.6%
3432954 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.55 46.0 3.28e-01 100.0% 35.1%
4998542 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.53 41.0 3.15e-01 100.0% 36.1%
D3 medium residues 178-217
PDB
Domain cluster: rep: NC_021342.2__YP_008869284.1__X848_gp71__00071__D167-204