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KY622015.1__ARB06274.1__SppYZU01_37__00037
Bact-VirKY622015.1__ARB06274.1__SppYZU01_37__00037
Identity
- Accession:
- KY622015 ↗
- Kingdom:
- phage
Quality
62.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 166-219
Domain cluster:
rep: MK373772.1__QBQ76654.1__PTXU04_00040__00040__D80-130
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yt4A01 | 3.30.160.590 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 36.0 | 4.15e-01 | 96.3% | 85.7% |
| 4cllA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.61 | 50.0 | 3.40e-01 | 94.4% | 41.4% |
| 4r33A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 41.0 | 2.48e-01 | 75.9% | 11.5% |
| 3onmA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 35.0 | 2.89e-01 | 77.8% | 36.5% |
| 3mk7C01 | 6.10.280.130 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 40.0 | 3.31e-01 | 81.5% | 57.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3926983 | 389.6.1.0 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain | 0.62 | 50.0 | 4.09e-01 | 100.0% | 45.2% |
| 3386233 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.62 | 51.0 | 3.60e-01 | 92.6% | 59.4% |
| 4880691 | 109.4.1.76 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Menin | 0.61 | 38.0 | 2.51e-01 | 79.6% | 15.9% |
| 3284380 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.61 | 49.0 | 4.59e-01 | 92.6% | 81.4% |
| 3256262 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.60 | 36.0 | 3.03e-01 | 79.6% | 34.7% |
| 3243669 | 4076.2.1.0 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like | 0.56 | 49.0 | 4.78e-01 | 98.1% | 93.3% |
| 5031902 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.55 | 41.0 | 3.91e-01 | 90.7% | 78.6% |
| 4958791 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 39.0 | 3.86e-01 | 90.7% | 80.0% |
| 3627202 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.50 | 36.0 | 2.90e-01 | 81.5% | 38.2% |
D2
high
residues 256-302
Domain cluster:
rep: OR348818.1__WNO24194.1__Scuro_33__00033__D264-310