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KY622015.1__ARB06284.1__SppYZU01_47__00047
Bact-VirKY622015.1__ARB06284.1__SppYZU01_47__00047
Identity
- Accession:
- KY622015 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-86
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 35.0 | 3.92e-01 | 82.4% | 63.1% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 41.0 | 4.42e-01 | 77.6% | 84.3% |
| 1g5hA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 46.0 | 3.25e-01 | 89.4% | 77.5% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.57 | 35.0 | 3.73e-01 | 84.7% | 70.3% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 48.0 | 4.06e-01 | 92.9% | 92.3% |
| 2k7iA01 | 3.30.160.160 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like | 0.55 | 30.0 | 3.70e-01 | 76.5% | 91.7% |
| 1c16A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.99e-01 | 81.2% | 94.8% |
| 3aqoA02 | 3.30.1360.200 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.55 | 47.0 | 4.04e-01 | 98.8% | 95.7% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.53 | 30.0 | 3.90e-01 | 78.8% | 100.0% |
| 3wbiA04 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 40.0 | 3.47e-01 | 88.2% | 70.3% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.51 | 34.0 | 2.98e-01 | 84.7% | 45.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4131749 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.58 | 51.0 | 4.73e-01 | 100.0% | 76.4% |
| 4959885 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.58 | 38.0 | 3.84e-01 | 89.4% | 67.1% |
| 4028728 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.56 | 33.0 | 3.97e-01 | 81.2% | 90.9% |
| 3496242 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 33.0 | 4.09e-01 | 81.2% | 100.0% |
| 4519674 | 4.1.1.186 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5397 | 0.56 | 34.0 | 3.83e-01 | 90.6% | 86.2% |
| 3061172 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 44.0 | 4.18e-01 | 91.8% | 73.3% |
| 5004850 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.55 | 32.0 | 3.95e-01 | 81.2% | 98.0% |
| 5037033 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 37.0 | 3.96e-01 | 87.1% | 85.7% |
| 4447444 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.54 | 38.0 | 2.46e-01 | 74.1% | 89.8% |
| 5054433 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 31.0 | 3.86e-01 | 78.8% | 98.0% |
| 3705718 | 9.1.1.46 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_5 | 0.53 | 41.0 | 3.45e-01 | 84.7% | 47.3% |
| 3594677 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 38.0 | 2.63e-01 | 78.8% | 77.2% |
| 3393645 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.52 | 44.0 | 3.30e-01 | 94.1% | 67.4% |
| 4224443 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.52 | 44.0 | 3.70e-01 | 100.0% | 96.9% |
| 3276532 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 45.0 | 3.12e-01 | 98.8% | 48.5% |
| 4998035 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 30.0 | 3.80e-01 | 76.5% | 100.0% |
| 3444177 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 37.0 | 3.81e-01 | 92.9% | 81.2% |
| 5006014 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.51 | 41.0 | 3.66e-01 | 91.8% | 86.2% |
| 3839415 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.50 | 42.0 | 3.91e-01 | 92.9% | 82.7% |