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KY629563.1__ARK07422.1__LAV_00022__00022
Bact-VirKY629563.1__ARK07422.1__LAV_00022__00022
Identity
- Accession:
- KY629563 ↗
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Taxonomy
TaxID: 1980139
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-135
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.85 | 75.0 | 7.83e-01 | 99.2% | 99.2% |
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.84 | 75.0 | 7.67e-01 | 100.0% | 96.0% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.83 | 73.0 | 7.33e-01 | 100.0% | 92.2% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.78 | 69.0 | 7.08e-01 | 100.0% | 97.6% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.78 | 73.0 | 6.97e-01 | 100.0% | 87.2% |
| 3npfA03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.75 | 72.0 | 6.58e-01 | 100.0% | 81.4% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.65 | 41.0 | 4.63e-01 | 80.0% | 82.2% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 50.0 | 5.08e-01 | 86.9% | 91.6% |
| 3ihpA03 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 50.0 | 3.72e-01 | 93.8% | 98.2% |
| 3i3tA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 48.0 | 3.74e-01 | 91.5% | 99.3% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.58 | 49.0 | 4.35e-01 | 92.3% | 96.8% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 33.0 | 4.01e-01 | 90.0% | 91.3% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 33.0 | 3.63e-01 | 85.4% | 76.9% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.51 | 31.0 | 3.59e-01 | 87.7% | 90.5% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 26.0 | 3.29e-01 | 76.2% | 87.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5063005 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.88 | 75.0 | 7.91e-01 | 100.0% | 98.3% |
| 3287024 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.87 | 72.0 | 7.24e-01 | 100.0% | 85.4% |
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 73.0 | 7.46e-01 | 100.0% | 92.8% |
| 3980140 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.84 | 73.0 | 7.24e-01 | 99.2% | 87.4% |
| 4078132 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.84 | 75.0 | 7.60e-01 | 100.0% | 94.5% |
| 4169712 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.84 | 75.0 | 7.67e-01 | 100.0% | 96.0% |
| 7406 | 219.1.1.40 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like | 0.83 | 79.0 | 5.87e-01 | 100.0% | 88.3% |
| 3278116 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.83 | 70.0 | 7.48e-01 | 99.2% | 100.0% |
| 153248 | 219.1.1.40 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like | 0.82 | 77.0 | 6.18e-01 | 100.0% | 97.9% |
| 3257922 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 57.0 | 6.65e-01 | 84.6% | 100.0% |
| 3969508 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 74.0 | 6.71e-01 | 100.0% | 97.6% |
| 1263590 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.76 | 72.0 | 6.66e-01 | 100.0% | 81.9% |
| 4646593 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.67 | 41.0 | 4.13e-01 | 80.0% | 60.0% |
| 3983510 | 219.1.1.152 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF26124 | 0.61 | 55.0 | 5.12e-01 | 99.2% | 100.0% |
| 4988502 | 375.1.1.298 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_HMPTM | 0.60 | 23.0 | 3.55e-01 | 88.5% | 95.6% |
| 4481026 | 4.1.1.407 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29661 | 0.59 | 28.0 | 3.90e-01 | 96.2% | 93.3% |
| 3629830 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 35.0 | 4.14e-01 | 86.2% | 90.6% |
| 3241793 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 39.0 | 4.27e-01 | 100.0% | 89.5% |
| 3515495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 37.0 | 4.21e-01 | 100.0% | 92.6% |
| 2041633 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.54 | 22.0 | 3.04e-01 | 89.2% | 75.0% |
| 4946882 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 21.0 | 3.11e-01 | 86.9% | 81.8% |
| 3881121 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 35.0 | 3.91e-01 | 99.2% | 87.0% |
| 3768094 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 36.0 | 3.93e-01 | 100.0% | 85.7% |
| 3217670 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.52 | 28.0 | 3.66e-01 | 99.2% | 97.1% |
| 5065441 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 23.0 | 3.18e-01 | 87.7% | 92.5% |
| 3913687 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 33.0 | 3.84e-01 | 88.5% | 91.1% |
| 3547102 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 31.0 | 3.68e-01 | 86.2% | 90.6% |
| 3768095 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 34.0 | 3.85e-01 | 100.0% | 92.6% |
| 4055256 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 32.0 | 3.63e-01 | 87.7% | 87.8% |