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KY629563.1__ARK07524.1__LAV_00149__00124

Bact-Vir

KY629563.1__ARK07524.1__LAV_00149__00124

Identity

Accession:
KY629563 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lacusarxvirus› Sphingobium_phage_Lacusarx

TaxID: 1980139

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-119
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.86 56.0 6.72e-01 91.8% 96.1%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.77 45.0 5.49e-01 91.8% 91.4%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.75 40.0 5.34e-01 84.5% 98.3%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 43.0 4.82e-01 90.0% 81.0%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 40.0 4.70e-01 88.2% 84.0%
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.66 35.0 4.27e-01 80.0% 81.2%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.65 39.0 4.72e-01 90.9% 90.4%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 35.0 4.31e-01 89.1% 87.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 35.0 4.25e-01 89.1% 88.4%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 30.0 3.32e-01 90.9% 56.7%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 28.0 3.76e-01 78.2% 83.9%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.59 39.0 4.62e-01 87.3% 98.6%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 35.0 4.15e-01 89.1% 86.7%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 39.0 3.66e-01 88.2% 54.9%
3mcaB01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.59 36.0 3.78e-01 93.6% 67.7%
1vwxZ00 2.30.30.770 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.10e-01 91.8% 63.7%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.58 47.0 4.26e-01 97.3% 65.5%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 35.0 4.16e-01 90.9% 97.1%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.57 40.0 4.16e-01 91.8% 77.9%
2vgmA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.56 40.0 3.86e-01 92.7% 65.6%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 35.0 4.16e-01 91.8% 95.9%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.56 41.0 4.54e-01 94.5% 94.4%
1whjA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.55 43.0 4.46e-01 92.7% 90.2%
1jqpA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 45.0 3.56e-01 96.4% 97.4%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
331968 4.1.1.55 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1653 0.83 56.0 6.56e-01 91.8% 96.2%
4051081 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.81 45.0 5.94e-01 86.4% 100.0%
4423306 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.79 44.0 5.23e-01 88.2% 80.0%
3987601 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 37.0 5.43e-01 80.0% 100.0%
3839369 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.79 43.0 5.05e-01 89.1% 75.0%
4068131 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.79 43.0 4.62e-01 88.2% 62.1%
4547406 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.76 44.0 5.09e-01 89.1% 78.8%
4077893 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 41.0 2.59e-01 88.2% 11.1%
4851967 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.75 42.0 5.43e-01 87.3% 98.4%
4339993 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.73 43.0 4.72e-01 90.0% 71.1%
3388362 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 43.0 2.59e-01 89.1% 9.5%
4519674 4.1.1.186 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5397 0.73 39.0 5.23e-01 90.0% 100.0%
4549410 506.2.1.0 ↗ beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain 0.72 42.0 2.43e-01 88.2% 7.2%
4331473 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.71 36.0 4.19e-01 89.1% 67.5%
4662947 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.71 35.0 4.50e-01 90.0% 81.5%
4335575 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 45.0 2.61e-01 89.1% 7.8%
4977206 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 36.0 4.63e-01 90.0% 90.0%
3951961 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.70 45.0 4.82e-01 89.1% 75.8%
4045576 4.1.1.161 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4178 0.69 40.0 5.00e-01 90.0% 96.9%
1112010 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.69 40.0 4.70e-01 88.2% 84.0%
3886139 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 38.0 4.70e-01 87.3% 93.8%
3848399 4.8.1.24 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.66 42.0 5.00e-01 98.2% 100.0%
3768116 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.65 41.0 3.29e-01 89.1% 33.0%
3648952 1.1.7.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.62 36.0 3.74e-01 92.7% 60.0%
4931113 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.61 39.0 3.93e-01 93.6% 63.6%
4012945 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 40.0 4.73e-01 89.1% 98.7%
5075528 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.60 35.0 3.81e-01 86.4% 67.8%
3783617 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.60 42.0 4.87e-01 91.8% 100.0%
3917043 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 41.0 3.52e-01 90.9% 45.1%
3259841 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 37.0 4.41e-01 84.5% 97.1%
3742627 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 45.0 4.61e-01 99.1% 83.7%
4013406 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 39.0 4.67e-01 85.5% 100.0%
3699364 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 39.0 4.69e-01 89.1% 100.0%
591 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 36.0 4.16e-01 90.0% 86.8%
3189521 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 41.0 4.61e-01 89.1% 92.9%
3720660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 35.0 4.13e-01 89.1% 88.0%
1174943 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.58 37.0 4.37e-01 87.3% 92.3%
3470175 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.58 39.0 4.52e-01 90.9% 95.0%
3237027 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.58 40.0 4.28e-01 91.8% 82.1%
3169636 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.58 43.0 4.80e-01 94.5% 100.0%
3309829 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.18e-01 100.0% 61.3%
3272197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 38.0 3.90e-01 90.0% 70.5%
577 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.57 41.0 3.65e-01 99.1% 52.5%
3254881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 36.0 4.24e-01 89.1% 96.0%
5037228 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.56 33.0 4.00e-01 90.0% 98.5%
1175108 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.55 38.0 3.82e-01 90.9% 68.8%
3830813 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.53 48.0 4.02e-01 98.2% 58.9%
26065 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.53 40.0 4.08e-01 100.0% 80.7%
3523144 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.53 47.0 3.94e-01 98.2% 60.5%
3617741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 47.0 3.82e-01 97.3% 56.6%
3546727 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 38.0 3.88e-01 97.3% 77.8%
3981045 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 39.0 3.48e-01 91.8% 54.7%
3714873 4.1.1.4 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L27e 0.52 44.0 3.96e-01 91.8% 84.0%
4932882 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.52 40.0 3.76e-01 93.6% 67.4%
3212698 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 43.0 3.68e-01 91.8% 92.8%
3597659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 43.0 4.07e-01 91.8% 93.3%
3833618 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.52 46.0 4.20e-01 98.2% 96.6%
3197566 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.51 40.0 4.22e-01 97.3% 96.0%
3213653 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.51 34.0 3.95e-01 82.7% 95.0%
4536848 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.51 40.0 3.82e-01 94.5% 71.5%
3185466 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.50 43.0 3.54e-01 94.5% 83.0%