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KY629563.1__ARK07556.1__LAV_00181__00156

Bact-Vir

KY629563.1__ARK07556.1__LAV_00181__00156

Identity

Accession:
KY629563 ↗
Kingdom:
phage

Quality

80.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lacusarxvirus› Sphingobium_phage_Lacusarx

TaxID: 1980139

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 49-103
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ubvA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.74 43.0 3.92e-01 96.4% 45.1%
1nzjA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 43.0 3.31e-01 96.4% 76.1%
4ex6A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 31.0 2.99e-01 96.4% 46.3%
3bqkA02 1.20.1310.20 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain 0.52 44.0 3.27e-01 100.0% 36.8%
4fdyA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.51 42.0 3.16e-01 100.0% 34.8%
3i01A01 1.20.1270.30 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.50 40.0 2.87e-01 90.9% 77.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4649365 101.1.2.62 ↗ alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD 0.53 36.0 3.24e-01 72.7% 59.5%
3498889 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.20e-01 100.0% 56.3%
1165712 235.1.1.21 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lysozyme_like 0.51 42.0 3.11e-01 100.0% 32.7%
4030531 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.50 42.0 3.31e-01 94.5% 45.8%